| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | P94084_MEDSA | 500 | 76.9 | 83.3 | (tr|P94084) Class I chitinase OS=Medicago sativa PE=2 SV=1 |
| TAIR_pep | AT3G12500.1 | 425 | 68.6 | 79.2 | | Symbols: PR3, PR-3, CHI-B, B-CHI, ATHCHIB | ATHCHIB (BASIC CHITINASE); chitinase | chr3:3962508-3963952 REVERSE |
| Medicago | IMGA|CT025534_17.4 | 488 | 75.0 | 83.0 | Glycoside hydrolase, family 19; Chitin-binding, type 1 chr03_pseudomolecule_IMGAG_V2 32708700-32707178 F EGN_Mt071002 20080227 |
| Soybean | Glyma02g04820.1 | 402 | 60.1 | 72.0 | |
| Lotus Consensus | KMC003023A_C01 | 1116 | 99.2 | 99.2 | KMC003023A_c01 |
| 3' Unigene | KMC005424A_C01 | 1084 | 99.3 | 99.3 | KMC005424A_c01 |
| 5' Unigene | R_KMC000940A_C01 | 1122 | 100.0 | 100.0 | R_KMC000940A_c01 |
| chr1.CM0017.200.nc | length: 322 aa. | |||
| IPR000726 | Glycoside hydrolase, family 19, catalytic | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004568 | chitinase activity | ||
| Biological Process | GO:0006032 | chitin catabolism | ||
| Biological Process | GO:0016998 | cell wall catabolism | ||
| BlastProDom | PD354900 | P94084_MEDSA_P94084; | 3e-126 | 81-312 |
| HMMPanther | PTHR22595 | CHITINASE-RELATED | 2e-125 | 151-322 |
| HMMPfam | PF00182 | Glyco_hydro_19 | 1.4e-180 | 75-305 |
| ScanRegExp | PS00773 | CHITINASE_19_1 | 8e-5 | 93-115 |
| ScanRegExp | PS00774 | CHITINASE_19_2 | 8e-5 | 218-228 |
| IPR001002 | Chitin-binding, type 1 | |||
| Molecular Function | GO:0008061 | chitin binding | ||
| BlastProDom | PD000609 | CHI2_PEA_P21226; | 7e-12 | 25-54 |
| FPrintScan | PR00451 | CHITINBINDNG | 1.8e-08 | 34-42 42-49 49-56 |
| HMMPfam | PF00187 | Chitin_bind_1 | 8e-19 | 24-63 |
| HMMSmart | SM00270 | no description | 5.6e-16 | 26-63 |
| ProfileScan | PS50941 | CHIT_BIND_I_2 | 11.100 | 24-65 |
| ScanRegExp | PS00026 | CHIT_BIND_I_1 | 8e-5 | 36-55 |
| no_ID | ||||
| Gene3D | 1.10.530.10 | no description | 8.9e-87 | 71-313 |
| Gene3D | 3.30.60.10 | no description | 6.9e-11 | 25-65 |
| HMMPanther | PTHR22595:SF11 | CLASS | 2e-125 | 151-322 |
| Seg | seg | seg | NA | 55-74 |
| superfamily | SSF53955 | Lysozyme-like | 3.9e-115 | 72-313 |
| superfamily | SSF57016 | Plant | 3e-14 | 25-71 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
7 | 25 |
| Name | Length | cTP | mTP | SP | other | Loc. | RC |
|---|---|---|---|---|---|---|---|
| chr1.CM0017.200.nc | 322 | 0.002 | 0.151 | 0.975 | 0.025 | S | 1 |
chr1.CM0017.200.nc extr 8, vacu 3, chlo 1, nucl 1, golg 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| chr1.CM0017.200.nc | Not targeted | -27.511 | -1.214 | -2.762 | 25.42% | -23.535 |