Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005424A_C01 KMC005424A_c01
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09687 chitinase (EC 3.2.1.14) class I - alfalfa gi|1800141... 254 5e-67
emb|CAA71402.1| chitinase [Medicago truncatula] 253 2e-66
sp|P21226|CHI2_PEA Endochitinase A2 precursor gi|1362059|pir||S5... 252 2e-66
dbj|BAB13369.1| class I chitinase [Psophocarpus tetragonolobus] 245 3e-64
gb|AAM77665.1|AF523071_1 chitinase KBchit5-3-1 [Leucaena leucoce... 243 1e-63
>pir||T09687 chitinase (EC 3.2.1.14) class I - alfalfa gi|1800141|gb|AAB41324.1|
class I chitinase [Medicago sativa]
gi|1800143|gb|AAB41325.1| class I chitinase [Medicago
sativa]
Length = 327
Score = 254 bits (649), Expect = 5e-67
Identities = 118/139 (84%), Positives = 127/139 (90%), Gaps = 3/139 (2%)
Frame = -2
Query: 574 QITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWS 395
QI+WNYNYGQCGRAIG DLLNNPD VATD VISFKTA+WFWMT QSPKPSCHDVITGRWS
Sbjct: 187 QISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGRWS 246
Query: 394 PSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGHNLDCA 215
PSSAD+AAGR+SGYGTVTNIINGGLECG+GQD RVQDRIGFYKRYCD+LGVGYG NLDC
Sbjct: 247 PSSADRAAGRLSGYGTVTNIINGGLECGRGQDGRVQDRIGFYKRYCDILGVGYGANLDCF 306
Query: 214 SQRPFGSN---SQLLLDTI 167
SQRPFGS+ S L L++I
Sbjct: 307 SQRPFGSSLSLSSLFLNSI 325
>emb|CAA71402.1| chitinase [Medicago truncatula]
Length = 325
Score = 253 bits (645), Expect = 2e-66
Identities = 117/139 (84%), Positives = 126/139 (90%), Gaps = 3/139 (2%)
Frame = -2
Query: 574 QITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWS 395
QI+WNYNYGQCGRAIG DLLNNPD VATD VISFKTA+WFWMT QSPKPSCHDVITGRWS
Sbjct: 185 QISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGRWS 244
Query: 394 PSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGHNLDCA 215
PSSAD+AAGR+ GYGTVTNIINGGLECG+GQD RVQDRIGFYKRYCD+LGVGYG NLDC
Sbjct: 245 PSSADRAAGRLPGYGTVTNIINGGLECGRGQDGRVQDRIGFYKRYCDILGVGYGDNLDCF 304
Query: 214 SQRPFGSN---SQLLLDTI 167
SQRPFGS+ S L L++I
Sbjct: 305 SQRPFGSSLSLSSLFLNSI 323
>sp|P21226|CHI2_PEA Endochitinase A2 precursor gi|1362059|pir||S56694 chitinase (EC
3.2.1.14) class I - garden pea gi|598347|gb|AAA75196.1|
chitinase class I
Length = 324
Score = 252 bits (644), Expect = 2e-66
Identities = 115/139 (82%), Positives = 126/139 (89%), Gaps = 3/139 (2%)
Frame = -2
Query: 574 QITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWS 395
QI+WNYNYGQCGRAIG DLLNNPD VATD VISFKTA+WFWMT QSPKPSCHDVITG W+
Sbjct: 183 QISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWT 242
Query: 394 PSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGHNLDCA 215
PSSAD+AAGR+ GYGTVTNIINGGLECG+GQDSRVQDRIGFYKRYCD+ G+GYG NLDC
Sbjct: 243 PSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCY 302
Query: 214 SQRPFGSN---SQLLLDTI 167
SQRPFGS+ S +LLDT+
Sbjct: 303 SQRPFGSSLPLSSILLDTV 321
>dbj|BAB13369.1| class I chitinase [Psophocarpus tetragonolobus]
Length = 315
Score = 245 bits (626), Expect = 3e-64
Identities = 113/132 (85%), Positives = 122/132 (91%)
Frame = -2
Query: 574 QITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWS 395
QI+WNYNYGQCGRAI DLLNNPD VATDA+ISFK+A+WFWMT QSPKPSCHDVITGRW+
Sbjct: 181 QISWNYNYGQCGRAISVDLLNNPDLVATDAIISFKSALWFWMTPQSPKPSCHDVITGRWT 240
Query: 394 PSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGHNLDCA 215
PSSADQAAGR+ GYGT+TNIINGGLECG+GQDSRVQDRIGFYKRYCDLL V YG+NLDC
Sbjct: 241 PSSADQAAGRLPGYGTLTNIINGGLECGRGQDSRVQDRIGFYKRYCDLLSVPYGNNLDCF 300
Query: 214 SQRPFGSNSQLL 179
SQRPFG NS LL
Sbjct: 301 SQRPFG-NSLLL 311
>gb|AAM77665.1|AF523071_1 chitinase KBchit5-3-1 [Leucaena leucocephala]
Length = 323
Score = 243 bits (621), Expect = 1e-63
Identities = 110/136 (80%), Positives = 124/136 (90%)
Frame = -2
Query: 574 QITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWS 395
Q++WNYNYGQCGRAIGADLLNNPD VA+DAVISFKTA+W WMTAQSPKPSCHDVITGRW+
Sbjct: 190 QLSWNYNYGQCGRAIGADLLNNPDLVASDAVISFKTALWSWMTAQSPKPSCHDVITGRWT 249
Query: 394 PSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGHNLDCA 215
PS AD AAGR+ GYGT TNIINGGLECG+GQD+R+ DRIGF+KRYCD+LGVGYG NLDC
Sbjct: 250 PSGADTAAGRLPGYGTTTNIINGGLECGRGQDARLADRIGFFKRYCDILGVGYGSNLDCY 309
Query: 214 SQRPFGSNSQLLLDTI 167
SQRPFGS+S L+D +
Sbjct: 310 SQRPFGSSS--LIDVL 323
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 536,372,185
Number of Sequences: 1393205
Number of extensions: 12259338
Number of successful extensions: 31194
Number of sequences better than 10.0: 356
Number of HSP's better than 10.0 without gapping: 29889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31025
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
