Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003023A_C01 KMC003023A_c01
(599 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09687 chitinase (EC 3.2.1.14) class I - alfalfa gi|1800141... 314 6e-85
pir||S57482 chitinase class 1 - cowpea (fragment) gi|871766|emb|... 288 3e-82
sp|P06215|CHIT_PHAVU ENDOCHITINASE PRECURSOR gi|169331|gb|AAA337... 294 4e-82
sp|P36361|CHI5_PHAVU ENDOCHITINASE CH5B PRECURSOR gi|81866|pir||... 292 2e-81
emb|CAA10189.1| class I chitinase [Cicer arietinum] 300 1e-80
>pir||T09687 chitinase (EC 3.2.1.14) class I - alfalfa gi|1800141|gb|AAB41324.1|
class I chitinase [Medicago sativa]
gi|1800143|gb|AAB41325.1| class I chitinase [Medicago
sativa]
Length = 327
Score = 314 bits (804), Expect = 6e-85
Identities = 141/178 (79%), Positives = 155/178 (86%), Gaps = 1/178 (0%)
Frame = +3
Query: 69 AEESNAEAKQGVLWCPGGICCSKYGWCGSTSEYCGEGCQSQGGGSTGGG-DLGSIISRDT 245
AE+ +A G CPGG+CCSK+GWCGST EYCG+GCQSQ GGS+GGG DLGS+ISRDT
Sbjct: 23 AEQCGKQA--GGALCPGGLCCSKFGWCGSTGEYCGDGCQSQCGGSSGGGGDLGSLISRDT 80
Query: 246 FNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTG 425
FN MLKHRDD GC KG YTYDAFISAAKA+P+F GDT+T+KREIAAF GQTSHETTG
Sbjct: 81 FNNMLKHRDDSGCQGKGLYTYDAFISAAKAFPNFANNGDTATKKREIAAFLGQTSHETTG 140
Query: 426 GRATAPDGPYAWGYCFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCG 599
G ATAPDGPYAWGYCFVREQNPS YC PSS++PCASGKQYYGRGPIQI+WNYNYGQCG
Sbjct: 141 GWATAPDGPYAWGYCFVREQNPSTYCQPSSEFPCASGKQYYGRGPIQISWNYNYGQCG 198
>pir||S57482 chitinase class 1 - cowpea (fragment) gi|871766|emb|CAA61278.1|
chitinase class 1 [Vigna unguiculata]
Length = 321
Score = 288 bits (737), Expect(2) = 3e-82
Identities = 125/170 (73%), Positives = 146/170 (85%)
Frame = +3
Query: 90 AKQGVLWCPGGICCSKYGWCGSTSEYCGEGCQSQGGGSTGGGDLGSIISRDTFNTMLKHR 269
++ G CPGG+CCS++GWCGST +YCG+GCQSQ GG DL ++I F+ MLKHR
Sbjct: 29 SQAGGALCPGGLCCSQFGWCGSTDDYCGKGCQSQCGGQPAPSDLSALIPGH-FDQMLKHR 87
Query: 270 DDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGRATAPDG 449
+DG CPA+GFYTYDAFI+ A+A+PSFG TGDT+TRKREIAAF GQTSHETTGG +APDG
Sbjct: 88 NDGACPARGFYTYDAFIAGARAFPSFGNTGDTATRKREIAAFLGQTSHETTGGWPSAPDG 147
Query: 450 PYAWGYCFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCG 599
PYAWGYCFVREQNPSAYCSP+ Q+PCASG+QYYGRGPIQI+WNYNYGQCG
Sbjct: 148 PYAWGYCFVREQNPSAYCSPTPQFPCASGQQYYGRGPIQISWNYNYGQCG 197
Score = 39.3 bits (90), Expect(2) = 3e-82
Identities = 19/34 (55%), Positives = 24/34 (69%)
Frame = +2
Query: 8 PQNEDEVGIAILVSFILVGWCRGEQCGSQAGGAL 109
P+N +A++V +LVG GEQCGSQAGGAL
Sbjct: 2 PKNRMIWSVAVVVWTVLVGGSWGEQCGSQAGGAL 35
>sp|P06215|CHIT_PHAVU ENDOCHITINASE PRECURSOR gi|169331|gb|AAA33756.1| chitinase (EC
3.2.1.14)
Length = 328
Score = 294 bits (753), Expect(2) = 4e-82
Identities = 130/164 (79%), Positives = 145/164 (88%), Gaps = 1/164 (0%)
Frame = +3
Query: 111 CPGGICCSKYGWCGSTSEYCGEGCQSQ-GGGSTGGGDLGSIISRDTFNTMLKHRDDGGCP 287
CPGG CCS++GWCGST++YCG GCQSQ GG S DL ++ISR TF+ MLKHR+DG CP
Sbjct: 39 CPGGNCCSQFGWCGSTTDYCGPGCQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACP 98
Query: 288 AKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGRATAPDGPYAWGY 467
AKGFYTYDAFI+AAKAYPSFG TGDT+TRKREIAAF GQTSHETTGG ATAPDGPYAWGY
Sbjct: 99 AKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGY 158
Query: 468 CFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCG 599
CFVRE+NPS YCS + Q+PCA G+QYYGRGPIQI+WNYNYGQCG
Sbjct: 159 CFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCG 202
Score = 32.7 bits (73), Expect(2) = 4e-82
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = +2
Query: 32 IAILVSFILVGWCRGEQCGSQAGGAL 109
+ ++ +LVG GEQCG QAGGAL
Sbjct: 13 VGVVWMLLLVGGSYGEQCGRQAGGAL 38
>sp|P36361|CHI5_PHAVU ENDOCHITINASE CH5B PRECURSOR gi|81866|pir||JQ0965 chitinase (EC
3.2.1.14) precursor - kidney bean
gi|255452|gb|AAB23263.1| chitinase [Phaseolus vulgaris]
Length = 327
Score = 292 bits (748), Expect(2) = 2e-81
Identities = 129/164 (78%), Positives = 146/164 (88%), Gaps = 1/164 (0%)
Frame = +3
Query: 111 CPGGICCSKYGWCGSTSEYCGEGCQSQ-GGGSTGGGDLGSIISRDTFNTMLKHRDDGGCP 287
CPGG CCS++GWCGST++YCG+ CQSQ GG S DL ++ISR TF+ +LKHR+DG CP
Sbjct: 38 CPGGNCCSQFGWCGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACP 97
Query: 288 AKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGRATAPDGPYAWGY 467
AKGFYTYDAFI+AAKAYPSFG TGDT+TRKREIAAF GQTSHETTGG ATAPDGPYAWGY
Sbjct: 98 AKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGY 157
Query: 468 CFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCG 599
CFVRE+NPSAYCS + Q+PCA G+QYYGRGPIQI+WNYNYGQCG
Sbjct: 158 CFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCG 201
Score = 32.3 bits (72), Expect(2) = 2e-81
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 41 LVSFILVGWCRGEQCGSQAGGAL 109
+V +LVG GEQCG QAGGAL
Sbjct: 15 VVWMLLVGGSYGEQCGRQAGGAL 37
>emb|CAA10189.1| class I chitinase [Cicer arietinum]
Length = 328
Score = 300 bits (767), Expect = 1e-80
Identities = 134/186 (72%), Positives = 154/186 (82%)
Frame = +3
Query: 42 WCRLY**DGAEESNAEAKQGVLWCPGGICCSKYGWCGSTSEYCGEGCQSQGGGSTGGGDL 221
WC AE+ +A G CPGG+CCSK+GWCGSTS+YCG+GCQSQ G +GGG +
Sbjct: 20 WC------WAEQCGKQA--GGALCPGGLCCSKFGWCGSTSDYCGDGCQSQCG--SGGGGV 69
Query: 222 GSIISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFG 401
GSIISRDTFN MLKHRDD GC KGFYTY+AFI+AAK +P G GDT+T+KREIAAF G
Sbjct: 70 GSIISRDTFNQMLKHRDDSGCEGKGFYTYEAFIAAAKYFPDLGNNGDTATKKREIAAFLG 129
Query: 402 QTSHETTGGRATAPDGPYAWGYCFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQITWNY 581
QTSHETTGG ++APDGPYAWGYCF+REQNPS YC PSS++PCASGKQYYGRGPIQ++WNY
Sbjct: 130 QTSHETTGGWSSAPDGPYAWGYCFLREQNPSTYCQPSSEYPCASGKQYYGRGPIQLSWNY 189
Query: 582 NYGQCG 599
NYGQCG
Sbjct: 190 NYGQCG 195
Score = 42.0 bits (97), Expect = 0.006
Identities = 17/24 (70%), Positives = 19/24 (78%)
Frame = +2
Query: 38 ILVSFILVGWCRGEQCGSQAGGAL 109
IL+ +LVGWC EQCG QAGGAL
Sbjct: 11 ILIVIVLVGWCWAEQCGKQAGGAL 34
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 619,636,357
Number of Sequences: 1393205
Number of extensions: 16003150
Number of successful extensions: 78081
Number of sequences better than 10.0: 559
Number of HSP's better than 10.0 without gapping: 59049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73569
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
