Miyakogusa Predicted Gene

Lj4g3v0987840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KWF8_SOYBN 325 78.1 83.3 (tr|I1KWF8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60080.1 250 61.1 72.9 | Symbols: | 3'-5'-exoribonuclease family protein | chr1:22152605-22154339 REVERSE LENGTH=302
Medicago Medtr1g007060.1 323 77.1 83.8 | exosome complex exonuclease RRP46 | HC | chr1:171864-178799 | 20130731
Soybean Glyma08g27080.1 325 78.1 83.3  
LJGI gnl|LJGI|TC75646 1017 94.8 94.8 similar to UniRef100_Q2PYZ2 Cluster: 3'-5'-exoribonuclease/RNA binding protein-like protein; n=1; Solanum tuberosum|Rep: 3'-5'-exoribonuclease/RNA binding protein-like protein - Solanum tuberosum (Potato), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0987840.1 length: 317 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
HMMPfam PF01138 RNase_PH 1.3e-05 17-115
117-194
IPR015847 Exoribonuclease, phosphorolytic domain 2
HMMPfam PF03725 RNase_PH_C 7.1e-05 235-279
superfamily SSF55666 Ribonuclease 5.7e-06 225-312
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 2.9e-05 18-125
149-198
no_ID  
HMMPanther PTHR11097 EXOSOME 2.5e-70 16-308
HMMPanther PTHR11097:SF9 EXOSOME 2.5e-70 16-308
Seg seg seg NA 94-113
170-188
Wolf-PSORT
Lj4g3v0987840.1	chlo 6, extr 3, cyto 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0987840.1