Miyakogusa Predicted Gene

Lj3g3v3678780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L5L1_SOYBN 516 77.5 81.6 (tr|I1L5L1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G63490.1 439 66.5 76.1 | Symbols: | Ribosomal protein L1p/L10e family | chr3:23444269-23446020 FORWARD LENGTH=346
Medicago Medtr0059s0060.1 479 93.2 96.0 | 50S ribosomal protein L1p | HC | scaffold0059:27467-21829 | 20130731
Soybean Glyma09g36120.1 516 77.5 81.6  
LJGI gnl|LJGI|TC58076 1731 100.0 100.0 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1; Vitis vinifera|Rep: Ribosomal protein L1 - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3678780.1 length: 331 aa.
IPR002143 Ribosomal protein L1
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015934 large ribosomal subunit    
HMMPfam PF00687 Ribosomal_L1 2.1e-43 114-315
IPR005878 Ribosomal protein L1, bacterial-type
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015934 large ribosomal subunit    
HMMTigr TIGR01169 rplA_bact: 7.8e-95 98-321
IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Gene3D G3DSA:3.30.190.20 no description 2e-42 254-321
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Gene3D G3DSA:3.40.50.790 no description 3.7e-38 163-253
IPR023673 Ribosomal protein L1, conserved site
PatternScan PS01199 RIBOSOMAL_L1 NA 215-233
IPR023674 Ribosomal protein L1, superfamily
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0015934 large ribosomal subunit    
superfamily SSF56808 Ribosomal 4.7e-76 100-322
no_ID  
HMMPanther PTHR23105 RIBOSOMAL 1.7e-122 120-331
HMMPanther PTHR23105:SF25 SUBFAMILY 1.7e-122 120-331
Seg seg seg NA 22-38
60-70
Wolf-PSORT
Lj3g3v3678780.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3678780.1