Miyakogusa Predicted Gene
- Lj3g3v3678780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3678780.1 Non Chatacterized Hit- tr|I1L5L1|I1L5L1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25240
PE,81.56,0,RIBOSOMAL_L1,Ribosomal protein L1, conserved site;
rplA_bact: ribosomal protein L1,Ribosomal protein,CUFF.46287.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58076 similar to UniRef100_A7Q228 Cluster: Ribosomal ... 1731 0.0
gnl|LJGI|TC63625 similar to UniRef100_A7Q228 Cluster: Ribosomal ... 1051 0.0
gnl|LJGI|GO025780 homologue to UniRef100_P49208 Cluster: 50S rib... 904 0.0
gnl|LJGI|FS357717 similar to UniRef100_A7Q228 Cluster: Ribosomal... 704 0.0
gnl|LJGI|FS352919 similar to UniRef100_A7Q228 Cluster: Ribosomal... 688 0.0
gnl|LJGI|GO025574 similar to UniRef100_A7Q228 Cluster: Ribosomal... 529 e-149
gnl|LJGI|TC79279 similar to UniRef100_A7Q228 Cluster: Ribosomal ... 260 1e-68
gnl|LJGI|BP067947 similar to UniRef100_Q9LE95 Cluster: 50S ribos... 157 2e-37
>gnl|LJGI|TC58076 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1; Vitis
vinifera|Rep: Ribosomal protein L1 - Vitis vinifera
(Grape), partial (71%)
Length = 1461
Score = 1731 bits (873), Expect = 0.0
Identities = 873/873 (100%)
Strand = Plus / Plus
Query: 124 gttctcaagcctcctaccaactccctccacctcacctccccccacttcaggcctgctgcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gttctcaagcctcctaccaactccctccacctcacctccccccacttcaggcctgctgcc 251
Query: 184 ctcgccgccgaggtcgaggtcgccgaaaccctcgacgacaaggaggatgatgggccctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcgccgccgaggtcgaggtcgccgaaaccctcgacgacaaggaggatgatgggccctcc 311
Query: 244 aagcctaagacagggaaggccgcattacttctcaagagggataggacaaggtctaagagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aagcctaagacagggaaggccgcattacttctcaagagggataggacaaggtctaagagg 371
Query: 304 ttcctggaaattcaaaaattgagggagcgtaagaaagagtacgacttgaagacagcaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttcctggaaattcaaaaattgagggagcgtaagaaagagtacgacttgaagacagcaata 431
Query: 364 tctttggttaaagaaacagctaagaccaaatttgtagaaacagtagaagctcatttccgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctttggttaaagaaacagctaagaccaaatttgtagaaacagtagaagctcatttccgc 491
Query: 424 ctcaacattgaccctaaatataatgatcaacagttaagagcaacagtaagtctgccaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctcaacattgaccctaaatataatgatcaacagttaagagcaacagtaagtctgccaaag 551
Query: 484 ggaactggaaagcccattaaagtggctgttctcactcaaggtgaaagatttgatgaagca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggaactggaaagcccattaaagtggctgttctcactcaaggtgaaagatttgatgaagca 611
Query: 544 aaaaacgcaggagctgatttggttggtggagaggacctgatagaacagataaaaggaggg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaaaacgcaggagctgatttggttggtggagaggacctgatagaacagataaaaggaggg 671
Query: 604 ttcatggaatttgacaagttaattgcttctccagatatgatgcctaaggttgcgatcctt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttcatggaatttgacaagttaattgcttctccagatatgatgcctaaggttgcgatcctt 731
Query: 664 gggaagattctggggccaagagggctgatgccaaatccaaaagctggcactgtaacagcc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gggaagattctggggccaagagggctgatgccaaatccaaaagctggcactgtaacagcc 791
Query: 724 aatattcctcaggctatatcagaattcaagcagggaaaagttgaatacagggcagacaaa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aatattcctcaggctatatcagaattcaagcagggaaaagttgaatacagggcagacaaa 851
Query: 784 actggaatcgtgcacttgcctttcggaaaagctgactttccagaagaggatctacttgta 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 actggaatcgtgcacttgcctttcggaaaagctgactttccagaagaggatctacttgta 911
Query: 844 aacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaaggtgtg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 aacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaaggtgtg 971
Query: 904 tactggaaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaatatcagg 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tactggaaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaatatcagg 1031
Query: 964 gacatgcttgattacaggcttcaatcagaatag 996
|||||||||||||||||||||||||||||||||
Sbjct: 1032 gacatgcttgattacaggcttcaatcagaatag 1064
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 120
>gnl|LJGI|TC63625 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1;
Vitis vinifera|Rep: Ribosomal protein L1 - Vitis
vinifera (Grape), partial (44%)
Length = 882
Score = 1051 bits (530), Expect = 0.0
Identities = 530/530 (100%)
Strand = Plus / Plus
Query: 124 gttctcaagcctcctaccaactccctccacctcacctccccccacttcaggcctgctgcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gttctcaagcctcctaccaactccctccacctcacctccccccacttcaggcctgctgcc 317
Query: 184 ctcgccgccgaggtcgaggtcgccgaaaccctcgacgacaaggaggatgatgggccctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctcgccgccgaggtcgaggtcgccgaaaccctcgacgacaaggaggatgatgggccctcc 377
Query: 244 aagcctaagacagggaaggccgcattacttctcaagagggataggacaaggtctaagagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagcctaagacagggaaggccgcattacttctcaagagggataggacaaggtctaagagg 437
Query: 304 ttcctggaaattcaaaaattgagggagcgtaagaaagagtacgacttgaagacagcaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttcctggaaattcaaaaattgagggagcgtaagaaagagtacgacttgaagacagcaata 497
Query: 364 tctttggttaaagaaacagctaagaccaaatttgtagaaacagtagaagctcatttccgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tctttggttaaagaaacagctaagaccaaatttgtagaaacagtagaagctcatttccgc 557
Query: 424 ctcaacattgaccctaaatataatgatcaacagttaagagcaacagtaagtctgccaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctcaacattgaccctaaatataatgatcaacagttaagagcaacagtaagtctgccaaag 617
Query: 484 ggaactggaaagcccattaaagtggctgttctcactcaaggtgaaagatttgatgaagca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggaactggaaagcccattaaagtggctgttctcactcaaggtgaaagatttgatgaagca 677
Query: 544 aaaaacgcaggagctgatttggttggtggagaggacctgatagaacagataaaaggaggg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaaaacgcaggagctgatttggttggtggagaggacctgatagaacagataaaaggaggg 737
Query: 604 ttcatggaatttgacaagttaattgcttctccagatatgatgcctaaggt 653
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttcatggaatttgacaagttaattgcttctccagatatgatgcctaaggt 787
Score = 95.6 bits (48), Expect = 5e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 52
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 135 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcacacacaag 186
>gnl|LJGI|GO025780 homologue to UniRef100_P49208 Cluster: 50S ribosomal protein L1,
chloroplast precursor; n=1; Pisum sativum|Rep: 50S
ribosomal protein L1, chloroplast precursor - Pisum
sativum (Garden pea), partial (73%)
Length = 642
Score = 904 bits (456), Expect = 0.0
Identities = 459/460 (99%)
Strand = Plus / Plus
Query: 272 ttctcaagagggataggacaaggtctaagaggttcctggaaattcaaaaattgagggagc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttctcaagagggataggacaaggtctaagaggttcctggaaattcaaaaattgagggagc 242
Query: 332 gtaagaaagagtacgacttgaagacagcaatatctttggttaaagaaacagctaagacca 391
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 243 gtaagaaagagtacgacttgaagacagcaatatttttggttaaagaaacagctaagacca 302
Query: 392 aatttgtagaaacagtagaagctcatttccgcctcaacattgaccctaaatataatgatc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aatttgtagaaacagtagaagctcatttccgcctcaacattgaccctaaatataatgatc 362
Query: 452 aacagttaagagcaacagtaagtctgccaaagggaactggaaagcccattaaagtggctg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aacagttaagagcaacagtaagtctgccaaagggaactggaaagcccattaaagtggctg 422
Query: 512 ttctcactcaaggtgaaagatttgatgaagcaaaaaacgcaggagctgatttggttggtg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttctcactcaaggtgaaagatttgatgaagcaaaaaacgcaggagctgatttggttggtg 482
Query: 572 gagaggacctgatagaacagataaaaggagggttcatggaatttgacaagttaattgctt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gagaggacctgatagaacagataaaaggagggttcatggaatttgacaagttaattgctt 542
Query: 632 ctccagatatgatgcctaaggttgcgatccttgggaagattctggggccaagagggctga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctccagatatgatgcctaaggttgcgatccttgggaagattctggggccaagagggctga 602
Query: 692 tgccaaatccaaaagctggcactgtaacagccaatattcc 731
||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgccaaatccaaaagctggcactgtaacagccaatattcc 642
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 110
>gnl|LJGI|FS357717 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1;
Vitis vinifera|Rep: Ribosomal protein L1 - Vitis
vinifera (Grape), partial (35%)
Length = 625
Score = 704 bits (355), Expect = 0.0
Identities = 386/399 (96%), Gaps = 13/399 (3%)
Strand = Plus / Minus
Query: 611 aatttgacaagttaattgcttctccagatatgatgcctaag-------------gttgcg 657
||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 625 aatttgacaagttaattgcttctccagatatgatgcctaagttgatcgtgtcaggttgcg 566
Query: 658 atccttgggaagattctggggccaagagggctgatgccaaatccaaaagctggcactgta 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atccttgggaagattctggggccaagagggctgatgccaaatccaaaagctggcactgta 506
Query: 718 acagccaatattcctcaggctatatcagaattcaagcagggaaaagttgaatacagggca 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acagccaatattcctcaggctatatcagaattcaagcagggaaaagttgaatacagggca 446
Query: 778 gacaaaactggaatcgtgcacttgcctttcggaaaagctgactttccagaagaggatcta 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacaaaactggaatcgtgcacttgcctttcggaaaagctgactttccagaagaggatcta 386
Query: 838 cttgtaaacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttgtaaacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaa 326
Query: 898 ggtgtgtactggaaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaat 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtgtgtactggaaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaat 266
Query: 958 atcagggacatgcttgattacaggcttcaatcagaatag 996
|||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcagggacatgcttgattacaggcttcaatcagaatag 227
>gnl|LJGI|FS352919 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1;
Vitis vinifera|Rep: Ribosomal protein L1 - Vitis
vinifera (Grape), partial (31%)
Length = 663
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Minus
Query: 650 aggttgcgatccttgggaagattctggggccaagagggctgatgccaaatccaaaagctg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aggttgcgatccttgggaagattctggggccaagagggctgatgccaaatccaaaagctg 514
Query: 710 gcactgtaacagccaatattcctcaggctatatcagaattcaagcagggaaaagttgaat 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcactgtaacagccaatattcctcaggctatatcagaattcaagcagggaaaagttgaat 454
Query: 770 acagggcagacaaaactggaatcgtgcacttgcctttcggaaaagctgactttccagaag 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acagggcagacaaaactggaatcgtgcacttgcctttcggaaaagctgactttccagaag 394
Query: 830 aggatctacttgtaaacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctg 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aggatctacttgtaaacttgcttgctgcaataaaatcagtagaggcaaacaaaccttctg 334
Query: 890 gtgctaaaggtgtgtactggaaaagcgcacacatatgctcagcaatgggaccatcagtta 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtgctaaaggtgtgtactggaaaagcgcacacatatgctcagcaatgggaccatcagtta 274
Query: 950 ggttaaatatcagggacatgcttgattacaggcttcaatcagaatag 996
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggttaaatatcagggacatgcttgattacaggcttcaatcagaatag 227
>gnl|LJGI|GO025574 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1;
Vitis vinifera|Rep: Ribosomal protein L1 - Vitis
vinifera (Grape), partial (24%)
Length = 630
Score = 529 bits (267), Expect = e-149
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 730 cctcaggctatatcagaattcaagcagggaaaagttgaatacagggcagacaaaactgga 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cctcaggctatatcagaattcaagcagggaaaagttgaatacagggcagacaaaactgga 219
Query: 790 atcgtgcacttgcctttcggaaaagctgactttccagaagaggatctacttgtaaacttg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atcgtgcacttgcctttcggaaaagctgactttccagaagaggatctacttgtaaacttg 279
Query: 850 cttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaaggtgtgtactgg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cttgctgcaataaaatcagtagaggcaaacaaaccttctggtgctaaaggtgtgtactgg 339
Query: 910 aaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaatatcagggacatg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaatatcagggacatg 399
Query: 970 cttgattacaggcttcaatcagaatag 996
|||||||||||||||||||||||||||
Sbjct: 400 cttgattacaggcttcaatcagaatag 426
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atggcttcgtgtaccgcaccttcttcatctctcatgctcacgcactcacaag 94
>gnl|LJGI|TC79279 similar to UniRef100_A7Q228 Cluster: Ribosomal protein L1; n=1;
Vitis vinifera|Rep: Ribosomal protein L1 - Vitis
vinifera (Grape), partial (11%)
Length = 457
Score = 260 bits (131), Expect = 1e-68
Identities = 134/135 (99%)
Strand = Plus / Plus
Query: 862 aaatcagtagaggcaaacaaaccttctggtgctaaaggtgtgtactggaaaagcgcacac 921
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 aaatcagtagaggcaaaccaaccttctggtgctaaaggtgtgtactggaaaagcgcacac 176
Query: 922 atatgctcagcaatgggaccatcagttaggttaaatatcagggacatgcttgattacagg 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atatgctcagcaatgggaccatcagttaggttaaatatcagggacatgcttgattacagg 236
Query: 982 cttcaatcagaatag 996
|||||||||||||||
Sbjct: 237 cttcaatcagaatag 251
Score = 69.9 bits (35), Expect = 3e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 827 aagaggatctacttgtaaacttgcttgctgcaata 861
|||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaggatctacttgtaaacttgcttgctgcaata 35
>gnl|LJGI|BP067947 similar to UniRef100_Q9LE95 Cluster: 50S ribosomal protein L1,
chloroplast precursor; n=1; Spinacia oleracea|Rep: 50S
ribosomal protein L1, chloroplast precursor - Spinacia
oleracea (Spinach), partial (8%)
Length = 401
Score = 157 bits (79), Expect = 2e-37
Identities = 138/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 843 aaacttgcttgctgcaataaaatcagtaga-ggcaaacaaaccttctggtgctaaaggtg 901
||||||||||||||| ||||| |||||||| ||||||| | | |||| || ||||||||
Sbjct: 401 aaacttgcttgctgccataaa-tcagtagacggcaaaccacctctctgctgttaaaggtg 343
Query: 902 tgtactggaaaagcgcacacatatgctcagcaatgggaccatcagttaggttaaatatca 961
|| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |
Sbjct: 342 tgagctggaaaagcgcacacaatcgctcagccatgggaccatcacttaggttaaatataa 283
Query: 962 gggacatgcttgattacaggcttcaatcagaatag 996
|||||||||||||||||||||||||||||||||||
Sbjct: 282 gggacatgcttgattacaggcttcaatcagaatag 248