Miyakogusa Predicted Gene

Lj3g3v3678780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3678780.1 Non Chatacterized Hit- tr|I1L5L1|I1L5L1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25240
PE,81.56,0,RIBOSOMAL_L1,Ribosomal protein L1, conserved site;
rplA_bact: ribosomal protein L1,Ribosomal protein,CUFF.46287.1
         (331 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63490.1 | Symbols:  | Ribosomal protein L1p/L10e family | ch...   439   e-123
AT3G63490.2 | Symbols:  | Ribosomal protein L1p/L10e family | ch...   300   1e-81
AT2G42710.1 | Symbols:  | Ribosomal protein L1p/L10e family | ch...   171   6e-43

>AT3G63490.1 | Symbols:  | Ribosomal protein L1p/L10e family |
           chr3:23444269-23446020 FORWARD LENGTH=346
          Length = 346

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/343 (66%), Positives = 261/343 (76%), Gaps = 18/343 (5%)

Query: 1   MASCTAPSSSLML------THSQDLSPXXXXXXXXXXXXXXXXXYPLVLKPPTN-----S 49
           MA+C A  SSLML      T SQDL+P                 +PL+L   +      +
Sbjct: 1   MAAC-ATHSSLMLAYAAASTRSQDLTPTPSLFSFASSRPNHLS-FPLLLLGGSRDRRCAA 58

Query: 50  LHLTSPHFRPXXXXXXXXXXXTLDDKEDDG-----PSKPKTGKAALLLKRDRTRSKRFLE 104
           +   S H              T +D E        P KPK GKAAL+LKRDRTRSKRFLE
Sbjct: 59  IDRASNHKFIVSAVAAEADLDTEEDLEQTATAVLDPPKPKKGKAALVLKRDRTRSKRFLE 118

Query: 105 IQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTG 164
           IQKLRE KKEYD+ TAISL+K+TA T+FVE+VEAHFRLNIDPKYNDQQLRATVSLPKGTG
Sbjct: 119 IQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTG 178

Query: 165 KPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKI 224
           + + VAVL QGE+ DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGKI
Sbjct: 179 QTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKI 238

Query: 225 LGPRGLMPNPKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLL 284
           LGPRGLMPNPKAGTVTANIPQAI EFK+GKVE+RADKTGIVH+PFGK +F EEDLL+N L
Sbjct: 239 LGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFL 298

Query: 285 AAIKSVEANKPSGAKGVYWKSAHICSAMGPSVRLNIRDMLDYR 327
           AA+KSVE NKP GAKGVYWKSAHICS+MGPS++LNIR+M+D++
Sbjct: 299 AAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFK 341


>AT3G63490.2 | Symbols:  | Ribosomal protein L1p/L10e family |
           chr3:23444269-23445777 FORWARD LENGTH=291
          Length = 291

 Score =  300 bits (767), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/287 (59%), Positives = 196/287 (68%), Gaps = 21/287 (7%)

Query: 1   MASCTAPSSSLML------THSQDLSPXXXXXXXXXXXXXXXXXYPLVLKPPTN-----S 49
           MA+C A  SSLML      T SQDL+P                 +PL+L   +      +
Sbjct: 1   MAAC-ATHSSLMLAYAAASTRSQDLTPTPSLFSFASSRPNHLS-FPLLLLGGSRDRRCAA 58

Query: 50  LHLTSPHFRPXXXXXXXXXXXTLDDKEDDG-----PSKPKTGKAALLLKRDRTRSKRFLE 104
           +   S H              T +D E        P KPK GKAAL+LKRDRTRSKRFLE
Sbjct: 59  IDRASNHKFIVSAVAAEADLDTEEDLEQTATAVLDPPKPKKGKAALVLKRDRTRSKRFLE 118

Query: 105 IQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTG 164
           IQKLRE KKEYD+ TAISL+K+TA T+FVE+VEAHFRLNIDPKYNDQQLRATVSLPKGTG
Sbjct: 119 IQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTG 178

Query: 165 KPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKI 224
           + + VAVL QGE+ DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGKI
Sbjct: 179 QTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKI 238

Query: 225 LGPRGLMPNPKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGK 271
           LGPRGLMPNPKAGTVTANIPQ+    ++GK+     K G+     GK
Sbjct: 239 LGPRGLMPNPKAGTVTANIPQSS---RRGKLNSEQTKLGLFTFHLGK 282


>AT2G42710.1 | Symbols:  | Ribosomal protein L1p/L10e family |
           chr2:17782352-17784830 FORWARD LENGTH=415
          Length = 415

 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 135/215 (62%), Gaps = 6/215 (2%)

Query: 115 YDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQ 174
           +DL  AI  +K  AK KF ET+EAH RL I+   ++  +R T++LP    K +KVA   +
Sbjct: 188 FDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAE 247

Query: 175 GERFDEAKNAGADLVGGEDLIEQI-KGGFMEFDKLIASPDMMPKVAILGKILGPRGLMPN 233
           G   ++AK AGAD+VGG +LIE+I K G ++FD+ +A+P MMP+V  + +IL   GLMPN
Sbjct: 248 GADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPN 307

Query: 234 PKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLLAAIKSVEAN 293
           PK G+VT ++ +A+ + K G  ++R DKT I+H+P GK  F EE L  N+ A + ++   
Sbjct: 308 PKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLA 367

Query: 294 KPSGAKGV-----YWKSAHICSAMGPSVRLNIRDM 323
           KP+G K       Y  + H+CS MG    ++I+ +
Sbjct: 368 KPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402