Miyakogusa Predicted Gene
- Lj3g3v3678780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3678780.1 Non Chatacterized Hit- tr|I1L5L1|I1L5L1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25240
PE,81.56,0,RIBOSOMAL_L1,Ribosomal protein L1, conserved site;
rplA_bact: ribosomal protein L1,Ribosomal protein,CUFF.46287.1
(331 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g36120.1 516 e-146
Glyma12g01210.1 499 e-141
Glyma06g42860.1 144 1e-34
Glyma12g15450.1 143 2e-34
Glyma03g28250.1 125 5e-29
Glyma15g37610.1 122 5e-28
Glyma10g06980.1 116 3e-26
Glyma05g21090.1 112 4e-25
Glyma02g33980.1 103 2e-22
Glyma17g26480.1 77 2e-14
>Glyma09g36120.1
Length = 345
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/347 (77%), Positives = 283/347 (81%), Gaps = 18/347 (5%)
Query: 1 MASCTAPSSSLMLTHSQDLSPXXXXXXXXXXXXXXXXXYPLVLKPPTNSLHLT----SPH 56
MASCTAP S LML HSQDLSP YPL+LKP + LH+ + H
Sbjct: 1 MASCTAPPS-LMLVHSQDLSPSLRSFSHRPISRTTFSLYPLLLKP-SKWLHIEPKSRTCH 58
Query: 57 FRPXXXXXXXXXXXTLDD-KEDDGP-----------SKPKTGKAALLLKRDRTRSKRFLE 104
T DD +EDDG +KPK GKAAL LKRDRTRSKRFLE
Sbjct: 59 ALVAALSAEVQVPETFDDTEEDDGADGSTATNTVPTTKPKKGKAALPLKRDRTRSKRFLE 118
Query: 105 IQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTG 164
IQ+LRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATV+LPKGTG
Sbjct: 119 IQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTG 178
Query: 165 KPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKI 224
KP+KVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK GFMEFDKLIASPDMMPKVA LGKI
Sbjct: 179 KPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLIASPDMMPKVASLGKI 238
Query: 225 LGPRGLMPNPKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLL 284
LGPRGLMPNPKAGTVT NIPQAI+EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLL
Sbjct: 239 LGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLL 298
Query: 285 AAIKSVEANKPSGAKGVYWKSAHICSAMGPSVRLNIRDMLDYRLQSE 331
AA+KSVEANKPSGAKGVYWKSAHICSAMGPS+RLNIR+MLDYR SE
Sbjct: 299 AAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRPPSE 345
>Glyma12g01210.1
Length = 340
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/351 (74%), Positives = 278/351 (79%), Gaps = 31/351 (8%)
Query: 1 MASCTAPSSSLMLTHSQDLSPXXXXXXXXXXXXXXXXXYPLVLKPPTNSLHLT----SPH 56
MASC+AP S LML H QDLS YPL+ KP + LH+ + H
Sbjct: 1 MASCSAPPS-LMLVHPQDLS---------RSQRTTFSLYPLLFKP-SKCLHIEPKSRTCH 49
Query: 57 FRPXXXXXXXXXXXTLDDKEDDGPS----------------KPKTGKAALLLKRDRTRSK 100
T+ D E+D S KPK GKAAL LKRDRTRSK
Sbjct: 50 ALVAALAAEVQVPLTVHDTEEDDGSDGSTATSAATTTTTTTKPKKGKAALPLKRDRTRSK 109
Query: 101 RFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLP 160
RFLEIQ+LRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATV+LP
Sbjct: 110 RFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLP 169
Query: 161 KGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAI 220
KGTGKP+KVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK GFMEFDKLIASPDMMPKVA
Sbjct: 170 KGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLIASPDMMPKVAS 229
Query: 221 LGKILGPRGLMPNPKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLL 280
LGKILGPRGLMPNPKAGTVT NIPQAI+EFKQGKVEYRADKTGIVHLPFGKADFPEEDLL
Sbjct: 230 LGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLL 289
Query: 281 VNLLAAIKSVEANKPSGAKGVYWKSAHICSAMGPSVRLNIRDMLDYRLQSE 331
VNLLAA+KSVEANKPSGAKGVYWKSAHICSAMGPS+RLNIR+MLDYR SE
Sbjct: 290 VNLLAAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRPPSE 340
>Glyma06g42860.1
Length = 399
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 7/215 (3%)
Query: 116 DLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQG 175
DL AI VK AK KF ETVEAH RL +D K + +R TV LP G K + VAV +G
Sbjct: 172 DLNEAIRQVKANAKAKFDETVEAHIRLGVDSKRTEMAVRGTVILPHGAPKAVSVAVFAEG 231
Query: 176 ERFDEAKNAGADLVGGEDLIEQIKGG--FMEFDKLIASPDMMPKVAILGKILGPRGLMPN 233
+EAK AGAD+VGG++LIE+I G ++ DK ++P M P + + + L R LMP+
Sbjct: 232 AEAEEAKAAGADIVGGKELIEEIASGKNKLKVDKCFSTPGMAPNLGKIAQYLRKRRLMPD 291
Query: 234 PKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLLAAIKSVEAN 293
K GT+T++I + E +QG+VE++ + I+H+ GK + EE L N+ A + +V
Sbjct: 292 KKLGTLTSDIAGQLKELRQGRVEFKMESKSILHVGLGKVSYKEEALRENISAFMNAVLLA 351
Query: 294 KPSGAKGV-----YWKSAHICSAMGPSVRLNIRDM 323
KP+G K Y S HI S MGP + ++I+ +
Sbjct: 352 KPAGLKKTSKYAGYVLSVHISSTMGPGLPVSIQSI 386
>Glyma12g15450.1
Length = 408
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 7/215 (3%)
Query: 116 DLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQG 175
DL AI VK AK KF ETVEAH RL +D K + +R TV LP G K + VAV +G
Sbjct: 181 DLNEAIRQVKTNAKAKFDETVEAHIRLGVDSKRTEMAVRGTVILPHGAPKAVSVAVFAEG 240
Query: 176 ERFDEAKNAGADLVGGEDLIEQIKGG--FMEFDKLIASPDMMPKVAILGKILGPRGLMPN 233
+EAK AGAD+VGG++LIE+I G ++ DK ++P M P + + + L R LMP+
Sbjct: 241 AEAEEAKAAGADIVGGKELIEEIASGKNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPD 300
Query: 234 PKAGTVTANIPQAISEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLVNLLAAIKSVEAN 293
K GT+T++I + E +QG+VE++ + I+H+ GK + EE L N+ A + +V
Sbjct: 301 KKLGTLTSDIAGQLKELRQGRVEFKMESKSILHVGLGKVSYKEEALRENISAFMNAVLLA 360
Query: 294 KPSGAKGV-----YWKSAHICSAMGPSVRLNIRDM 323
KP+G K Y S H+ S MGP + ++I+ +
Sbjct: 361 KPAGLKKTSKYAGYVLSVHVSSTMGPGLPVSIQSI 395
>Glyma03g28250.1
Length = 85
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/68 (91%), Positives = 66/68 (97%)
Query: 92 LKRDRTRSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQ 151
LKRD+TRSKR LEIQ+LRERKKEYDLKTAISLVKET+KTKFVETV A+FRLNIDPKYNDQ
Sbjct: 14 LKRDKTRSKRSLEIQQLRERKKEYDLKTAISLVKETSKTKFVETVAAYFRLNIDPKYNDQ 73
Query: 152 QLRATVSL 159
QLRATVSL
Sbjct: 74 QLRATVSL 81
>Glyma15g37610.1
Length = 136
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/65 (93%), Positives = 62/65 (95%)
Query: 92 LKRDRTRSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQ 151
LKRDRT SKR LEIQ+LRERKKEYDLKTAISLVKETAKTKF ETVEAHFRLNIDPKYNDQ
Sbjct: 72 LKRDRTSSKRSLEIQQLRERKKEYDLKTAISLVKETAKTKFGETVEAHFRLNIDPKYNDQ 131
Query: 152 QLRAT 156
QLRAT
Sbjct: 132 QLRAT 136
>Glyma10g06980.1
Length = 60
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/60 (95%), Positives = 58/60 (96%)
Query: 97 TRSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRAT 156
TRSKR LEIQ+LRERKKEYDLKTAISLVKETAKTKFVETV AHFRLNIDPKYNDQQLRAT
Sbjct: 1 TRSKRSLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVAAHFRLNIDPKYNDQQLRAT 60
>Glyma05g21090.1
Length = 59
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 56/59 (94%)
Query: 98 RSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRAT 156
RSKR LEIQ+LRERKKEYDLKTAISLVKE AKT FVETVEAHFRLNIDPKYNDQQLRAT
Sbjct: 1 RSKRSLEIQQLRERKKEYDLKTAISLVKEIAKTNFVETVEAHFRLNIDPKYNDQQLRAT 59
>Glyma02g33980.1
Length = 61
Score = 103 bits (257), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/61 (81%), Positives = 54/61 (88%)
Query: 96 RTRSKRFLEIQKLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRA 155
+TRSKRFLEIQ+LRE KEYD+KT I LVKET KTKFVE V+AHF LNIDPKYNDQQLRA
Sbjct: 1 QTRSKRFLEIQQLREHNKEYDMKTTIYLVKETTKTKFVEIVDAHFCLNIDPKYNDQQLRA 60
Query: 156 T 156
T
Sbjct: 61 T 61
>Glyma17g26480.1
Length = 43
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 38/43 (88%)
Query: 175 GERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 217
GE+ DEAKNAG DLVGGE LIEQIK FMEFDKLIASPDMMPK
Sbjct: 1 GEKIDEAKNAGVDLVGGEHLIEQIKARFMEFDKLIASPDMMPK 43