Miyakogusa Predicted Gene

Lj2g3v0146560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L2U5_SOYBN 1469 88.6 92.8 (tr|I1L2U5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G10690.1 1237 74.8 85.9 | Symbols: GYRA | DNA GYRASE A | chr3:3339612-3346243 REVERSE LENGTH=950
Medicago Medtr1g031690.1 1469 81.2 87.8 | DNA gyrase subunit A | HC | chr1:11104096-11086066 | 20130731
Soybean Glyma09g21300.1 1460 86.9 91.0  
LJGI gnl|LJGI|TC57614 1183 98.9 98.9 similar to UniRef100_Q5YLB5 Cluster: DNA gyrase subunit A, chloroplast/mitochondrial precursor; n=1; Nicotiana benthamiana|Rep: DNA gyrase subunit A, chloroplast/mitochondrial precursor - Nicotiana benthamiana, partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0146560.1 length: 914 aa.
IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006265 DNA topological change    
HMMPfam PF00521 DNA_topoisoIV 1.1e-149 122-556
HMMSmart SM00434 DNA 1.3e-238 101-557
IPR005743 DNA gyrase, subunit A
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
HMMTigr TIGR01063 gyrA: 0 99-914
IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003916 DNA topoisomerase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0006265 DNA topological change    
HMMPfam PF03989 DNA_gyraseA_C 0.0017 598-644
647-696
704-744
751-796
823-868
881-914
IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Biological Process GO:0006265 DNA topological change    
Gene3D G3DSA:3.90.199.10 no description 9e-115 426-491
IPR013760 DNA topoisomerase, type IIA-like domain
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
superfamily SSF56719 Type 4.2e-170 96-583
IPR024946 Arginine repressor C-terminal-like domain
Gene3D G3DSA:3.30.1360.40 no description 2e-36 327-425
no_ID  
Gene3D G3DSA:2.120.10.90 no description 6.3e-90 591-914
HMMPanther PTHR10169 DNA 1.9e-248 41-747
HMMPanther PTHR10169:SF4 DNA 1.9e-248 41-747
Seg seg seg NA 3-36
58-92
217-235
327-335
superfamily SSF101904 GyrA/ParC 4.7e-76 592-914
Wolf-PSORT
Lj2g3v0146560.1	chlo 12, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0146560.1