Miyakogusa Predicted Gene
- Lj2g3v0146560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0146560.1 Non Chatacterized Hit- tr|I1L2U5|I1L2U5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.72,0,gyrA: DNA
gyrase, A subunit,DNA gyrase, subunit A; DNA GYRASE SUBUNIT A,NULL;
DNA TOPOISOMERASE/GYRA,CUFF.34286.1
(2742 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57614 similar to UniRef100_Q5YLB5 Cluster: DNA gyrase... 1183 0.0
gnl|LJGI|TC61435 homologue to UniRef100_Q2HTL3 Cluster: WD40-lik... 613 e-174
gnl|LJGI|AV420025 homologue to UniRef100_Q2HTL3 Cluster: WD40-li... 476 e-133
>gnl|LJGI|TC57614 similar to UniRef100_Q5YLB5 Cluster: DNA gyrase subunit A,
chloroplast/mitochondrial precursor; n=1; Nicotiana
benthamiana|Rep: DNA gyrase subunit A,
chloroplast/mitochondrial precursor - Nicotiana
benthamiana, partial (20%)
Length = 859
Score = 1183 bits (597), Expect = 0.0
Identities = 611/618 (98%)
Strand = Plus / Plus
Query: 181 acccgacggcgccccgccacggctgtccgggcctccggaaacggcagcgtgacggttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acccgacggcgccccgccacggctgtccgggcctccggaaacggcagcgtgacggttgtg 301
Query: 241 aacggtaacagcaacagtggtaataatggtgatggcaggagtgaaggaaggattctgacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacggtaacagcaacagtggtaataatggtgatggcaggagtgaaggaaggattctgacg 361
Query: 301 aaggagcttcacaaagaggccacggaggcttacatgtcgtatgcgatgtccgtgttgctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaggagcttcacaaagaggccacggaggcttacatgtcgtatgcgatgtccgtgttgctc 421
Query: 361 ggtcgtgctctgccggacgttcgcgacgggttgaagccagtgcacagaaggattctattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtcgtgctctgccggacgttcgcgacgggttgaagccagtgcacagaaggattctattt 481
Query: 421 gcaatgcatgagctcggtctctcttcnnnnnnntcattcaagaaatgtgcaagagttgtt 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 482 gcaatgcatgagctcggtctctcttcaaaaaaatcattcaagaaatgtgcaagagttgtt 541
Query: 481 ggagaggtattgggaaaattccaccctcatggagactctgctgtgtatgattccttggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggagaggtattgggaaaattccaccctcatggagactctgctgtgtatgattccttggtg 601
Query: 541 cggatggctcaggatttttcgttgcgctatcctttgatccaaggtcatggaaattttggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggatggctcaggatttttcgttgcgctatcctttgatccaaggtcatggaaattttggg 661
Query: 601 tcaattgatgctgatcctgctgctgccatgcgttacacagagtccagactggaagaattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcaattgatgctgatcctgctgctgccatgcgttacacagagtccagactggaagaattg 721
Query: 661 gctgaagcagtgttgttggcagatctagagctagatacagttgattttgttccaaatttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gctgaagcagtgttgttggcagatctagagctagatacagttgattttgttccaaatttt 781
Query: 721 gataattcacagaaagaaccatcagttctacctgctcgtcttccaatcttattgttaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gataattcacagaaagaaccatcagttctacctgctcgtcttccaatcttattgttaaat 841
Query: 781 ggtgcttctgggattgcg 798
||||||||||||||||||
Sbjct: 842 ggtgcttctgggattgcg 859
Score = 89.7 bits (45), Expect = 9e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 71 tggcactttcctccgcgctcagagtcctcagactctcccctttcg 115
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tggcactttcctccgcgctcagagtcctcagactctcccctttcg 176
>gnl|LJGI|TC61435 homologue to UniRef100_Q2HTL3 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (31%)
Length = 743
Score = 613 bits (309), Expect = e-174
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 2434 cctggaaacaatgggaagagccaaaatggcccatggttgttgtttgtttcagagagtggc 2493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggaaacaatgggaagagccaaaatggcccatggttgttgtttgtttcagagagtggc 60
Query: 2494 tatggaaagcgggttcctttaagcagtttccgaatgtcatctttgaatcgaattggtttg 2553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatggaaagcgggttcctttaagcagtttccgaatgtcatctttgaatcgaattggtttg 120
Query: 2554 ataggatacaagttctctgctgaggatcgcttggctgctgtttttgtggttgggttctca 2613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataggatacaagttctctgctgaggatcgcttggctgctgtttttgtggttgggttctca 180
Query: 2614 ttagcagaggatggtgaaagtgatgaacaagtggttctcgtaagccaaagtggtacagtg 2673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagcagaggatggtgaaagtgatgaacaagtggttctcgtaagccaaagtggtacagtg 240
Query: 2674 aacagaattaaggttcgggatatttcaatacaatctcgatttgcaaggggtgttattttg 2733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacagaattaaggttcgggatatttcaatacaatctcgatttgcaaggggtgttattttg 300
Query: 2734 atgcggctt 2742
|||||||||
Sbjct: 301 atgcggctt 309
>gnl|LJGI|AV420025 homologue to UniRef100_Q2HTL3 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (20%)
Length = 240
Score = 476 bits (240), Expect = e-133
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1948 ctttatttcagtgataagggaacagtatactcagctcgtgcttataaaattcctgaatgt 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttatttcagtgataagggaacagtatactcagctcgtgcttataaaattcctgaatgt 60
Query: 2008 agccggactgcggctggtactccacttattcagatcttatctttatctgatggtgaaaga 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agccggactgcggctggtactccacttattcagatcttatctttatctgatggtgaaaga 120
Query: 2068 ataacatccattattcctgtgagtgagtttgctgaagatcagtttttggtgatgcttaca 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataacatccattattcctgtgagtgagtttgctgaagatcagtttttggtgatgcttaca 180
Query: 2128 atgcaaggttatatcaagagagtatccttgaattcattttcatcaatcagatcgaccgga 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcaaggttatatcaagagagtatccttgaattcattttcatcaatcagatcgaccgga 240