Miyakogusa Predicted Gene

Lj2g3v0146560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0146560.1 Non Chatacterized Hit- tr|I1L2U5|I1L2U5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.72,0,gyrA: DNA
gyrase, A subunit,DNA gyrase, subunit A; DNA GYRASE SUBUNIT A,NULL;
DNA TOPOISOMERASE/GYRA,CUFF.34286.1
         (914 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g21300.1                                                      1460   0.0  
Glyma07g23500.1                                                       619   e-177
Glyma07g23510.1                                                       191   4e-48
Glyma07g23570.1                                                       176   1e-43
Glyma07g23530.1                                                        80   8e-15
Glyma15g43170.1                                                        68   5e-11
Glyma10g11610.1                                                        64   6e-10

>Glyma09g21300.1 
          Length = 951

 Score = 1460 bits (3779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 727/837 (86%), Positives = 762/837 (91%), Gaps = 16/837 (1%)

Query: 94  SEGRILTKELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKSF 153
           SEGR++  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKK F
Sbjct: 87  SEGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPF 146

Query: 154 KKCARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRYPLIQGHGNFGSIDADPAAAMRYT 213
           KKCARVVGEVLGKFHPHGD+AVYDSLVRMAQDFSLR PLIQGHGNFGSIDADP AAMRYT
Sbjct: 147 KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYT 206

Query: 214 ESRXXXXXXXXXXXXXXXXXXXFVPNFDNSQKEPSVLPARLPILLLNGASGIAVGMATNI 273
           E R                   FVPNFDNSQKEPS+LPARLP LLLNG+SGIAVGMATNI
Sbjct: 207 ECRLDDLTEAMLLTDLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNI 266

Query: 274 PPHNLGELVDVLRVLIHNPEATLQEMLEYMPGPDFPTGGVIMGNLGILEAYRTXXXXXXX 333
           PPHNLGE+VDVL VLIHNPEATLQE+LEYMPGPDFPTGG+IMGNLGILEAYRT       
Sbjct: 267 PPHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVII 326

Query: 334 XXKTEFELLDSKTKRTAIIIKEIPYQTNKAALVEKIAELVENKSLDGISDIRDESDRSGM 393
             KT+ ELLDSKTKRTAIIIKEIPYQTNKA LVEKIAELVENKSLDGISDIRDESDRSGM
Sbjct: 327 RGKTDIELLDSKTKRTAIIIKEIPYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGM 386

Query: 394 RIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQTGLKELLQEFLDFRCSV 453
           RIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQ GLKELLQ FLDFRCSV
Sbjct: 387 RIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSV 446

Query: 454 IERRARFKLSKAQERRHIVEGILIGFDNLDRVIHIIREASSNSIATAGLRNEFSLSEKQA 513
           +ERRARFKLS+AQERRHIVEGILIGFDNLD VI IIREASSNS A AGLRN FSLSEKQA
Sbjct: 447 VERRARFKLSQAQERRHIVEGILIGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQA 506

Query: 514 EALMDISLRRLTRRESGNFLAESKSLMEQISKLEELLSSRSNILEVIEQEAIELKNKFAD 573
           EAL+DISLRRL+ RESGNF+AESKSLMEQISKLEELLSSR NILE+IEQEAIELK+KF++
Sbjct: 507 EALLDISLRRLSLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSN 566

Query: 574 PRRSMLEDTDNGQLEDIDVIPNDEIILALSEKGYVKRMKPNTFNLQNRGTIGKSVGKLKV 633
           PRRSMLEDTDNGQLEDIDVIPN+E+ILALSEKGY+KRMKP+TFNLQNRGTIGKSVGKLKV
Sbjct: 567 PRRSMLEDTDNGQLEDIDVIPNEEMILALSEKGYMKRMKPSTFNLQNRGTIGKSVGKLKV 626

Query: 634 NDSMSDFLVCRAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTPLIQILSLSDGERITSI 693
           NDSMSDFLVC AHDHVLYFSDKGTVYSARAYKIPECSRTAAGTPL+QILSLSDGERITSI
Sbjct: 627 NDSMSDFLVCHAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSI 686

Query: 694 IPVSEFAEDQFLVMLTMQGYIKRVSLNSFSSIRSTGIIAIQLVPGDELKWVHLCTNDDFV 753
           IPVSEFAEDQFL+MLTMQGYIKRVSLN FSSIRS GIIAIQLVPGDELKWV LC+NDDFV
Sbjct: 687 IPVSEFAEDQFLLMLTMQGYIKRVSLNLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFV 746

Query: 754 AMASHNGMVILSLCSK----------------IRTLGRNTRGAVAMRLREGDRMASMDII 797
           AMASHNGMV+LS CSK                IRTL RNTRGA AMRL++GD+MAS+DII
Sbjct: 747 AMASHNGMVMLSQCSKATLNFTAIMRYLLNNLIRTLSRNTRGAPAMRLKKGDKMASVDII 806

Query: 798 PAAMWNNLESLSKSPGNNGKSQNGPWLLFVSESGYGKRVPLSSFRMSSLNRIGLIGYKFS 857
           PAAMWNNLE+ SK PG N KSQNGPWLLFVSE+GYGKRVPLSSFR+SSLNR+GLIGYKFS
Sbjct: 807 PAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGYGKRVPLSSFRISSLNRVGLIGYKFS 866

Query: 858 AEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRL 914
           AEDRLAAVFVVGFS AEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRL
Sbjct: 867 AEDRLAAVFVVGFSSAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRL 923



 Score = 54.3 bits (129), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 49/262 (18%)

Query: 596 DEIILALSEKGYVKRMKPNTFNLQNRGTIGKSVGKLKVNDSMSDFLVCRAHDHVLYFSDK 655
           D+ +L L+ +GY+KR+  N F+  +  +IG    +L   D +    +C   D V   S  
Sbjct: 695 DQFLLMLTMQGYIKRVSLNLFS--SIRSIGIIAIQLVPGDELKWVRLCSNDDFVAMASHN 752

Query: 656 GTVYSARAYK----------------IPECSRTAAGTPLIQILSLSDGERITS--IIPVS 697
           G V  ++  K                I   SR   G P ++   L  G+++ S  IIP +
Sbjct: 753 GMVMLSQCSKATLNFTAIMRYLLNNLIRTLSRNTRGAPAMR---LKKGDKMASVDIIPAA 809

Query: 698 EF-------------AEDQ---FLVMLTMQGYIKRVSLNSF--SSIRSTGIIAIQLVPGD 739
            +             A+ Q   +L+ ++  GY KRV L+SF  SS+   G+I  +    D
Sbjct: 810 MWNNLETTSKFPGINAKSQNGPWLLFVSENGYGKRVPLSSFRISSLNRVGLIGYKFSAED 869

Query: 740 ELKWVHLC--------TNDDFVAMASHNGMVILSLCSKIRTLGRNTRGAVAMRLREGDRM 791
            L  V +          +D+ V + S +G V       I    R  RG + MRL    ++
Sbjct: 870 RLAAVFVVGFSSAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLDHSGKI 929

Query: 792 ASMDIIPAAMWNNLESLSKSPG 813
            S  +I A      E L+ + G
Sbjct: 930 QSASLISATDCEPEEVLAIAQG 951


>Glyma07g23500.1 
          Length = 442

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/378 (81%), Positives = 334/378 (88%), Gaps = 28/378 (7%)

Query: 558 EVIEQEAIELKNKFADPRRSMLEDTDNGQLEDIDVIPNDEIILALSEKGYVKRMKPNTFN 617
           ++IEQEAIE+KNKF++PR SMLEDTD+GQLEDIDVIPN+E+ILALSEKGYVKRMKPNTFN
Sbjct: 46  QLIEQEAIEMKNKFSNPRPSMLEDTDDGQLEDIDVIPNEEMILALSEKGYVKRMKPNTFN 105

Query: 618 LQNRGTIGKSVGKLKVNDSMSDFLVCRAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTP 677
           LQNRGTIGKSVGKLKVNDSMSDFLV RAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTP
Sbjct: 106 LQNRGTIGKSVGKLKVNDSMSDFLVFRAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTP 165

Query: 678 LIQILSLSDGERITSIIPVSEFAEDQFLVMLTMQGYIKRVSLNSFSSIRSTGIIAIQLVP 737
           L+QILSLSDGERITSIIPVSEFAEDQFL+MLTMQGYIKRVSLN FSSIRS GIIAIQLV 
Sbjct: 166 LVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQGYIKRVSLNLFSSIRSIGIIAIQLVH 225

Query: 738 GDELKWVHLCTNDDFVAMASHNGMVILSLCSK------------------------IRTL 773
           GDELKWV LC+NDDFVAMASHNGMV+LS C                          IRTL
Sbjct: 226 GDELKWVRLCSNDDFVAMASHNGMVMLSQCMYRKPNPNENLSTSLLKLFCSLLILFIRTL 285

Query: 774 GRNTRGAVAMRLREGDRMASMDIIPAAMWNNLESLSKSPGNNGKSQNGPWLLFVSESGYG 833
           GRNTRGA+AMRL++GD+MAS+DIIP+AMWNNLE+ SK PG+N K+QNGPWLLFVSE+GYG
Sbjct: 286 GRNTRGALAMRLKKGDKMASVDIIPSAMWNNLETSSKFPGSNAKNQNGPWLLFVSENGYG 345

Query: 834 KRVPLSSFRMSSLNRIGLIGYKFSAEDRLAAVFV---VGFSLAEDGESDEQVVLVSQSGT 890
           KRVPL SFR+SSLNR+GLIGYKFSAEDRLAAVFV     FS  ++GESDEQVVL+SQSGT
Sbjct: 346 KRVPLCSFRISSLNRVGLIGYKFSAEDRLAAVFVFNSASFSY-KNGESDEQVVLISQSGT 404

Query: 891 VNRIKVRDISIQSRFARG 908
           VNRIKVRDISIQSRFARG
Sbjct: 405 VNRIKVRDISIQSRFARG 422


>Glyma07g23510.1 
          Length = 279

 Score =  191 bits (484), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/97 (94%), Positives = 94/97 (96%)

Query: 377 SLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQ 436
           SLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFS NMVGILNGQPKQ
Sbjct: 91  SLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSYNMVGILNGQPKQ 150

Query: 437 TGLKELLQEFLDFRCSVIERRARFKLSKAQERRHIVE 473
            GLKELLQ FLDFRCSV+ERRARFKLS+AQERRHIVE
Sbjct: 151 MGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVE 187


>Glyma07g23570.1 
          Length = 188

 Score =  176 bits (445), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/154 (62%), Positives = 106/154 (68%), Gaps = 6/154 (3%)

Query: 37  PFVSLTRPSPLRLASSELRFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEG 96
           PF+   +PS LR A SELRFL                                    +EG
Sbjct: 14  PFL---QPSRLRHAPSELRFLSSRAPRRSASAVWASQHRDDENGSVPTATDNGSG--TEG 68

Query: 97  RILTKELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKSFKKC 156
           R++  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRILFAM ELGL+SKK FKKC
Sbjct: 69  RVVPAELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMPELGLASKKPFKKC 128

Query: 157 ARVVGEVLGKFHPHGDSAVYDSLVRMAQDFSLRY 190
           ARVVGEVLGKFHPHGD+AVYDSLVRMAQ  S+R+
Sbjct: 129 ARVVGEVLGKFHPHGDTAVYDSLVRMAQ-VSIRF 161


>Glyma07g23530.1 
          Length = 59

 Score = 80.5 bits (197), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/59 (72%), Positives = 45/59 (76%)

Query: 318 LGILEAYRTXXXXXXXXXKTEFELLDSKTKRTAIIIKEIPYQTNKAALVEKIAELVENK 376
           L ILEAYRT         KT+ E LDSKTKRTAIIIKEIPYQTNKA LVEK+ ELVENK
Sbjct: 1   LRILEAYRTGRGRVIIRGKTDIEFLDSKTKRTAIIIKEIPYQTNKATLVEKVVELVENK 59


>Glyma15g43170.1 
          Length = 1472

 Score = 67.8 bits (164), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 156/376 (41%), Gaps = 46/376 (12%)

Query: 120  LGRALPDVRDGLKPVHRRILFAMHELGLSSKKSFKKCARVVGEV--LGKFHPHGDSAVYD 177
            L R++P + DGLKP  R+ILF   +  LS +    K  + +G V     +H HG+ ++  
Sbjct: 691  LQRSIPSMVDGLKPGQRKILFCSFKKKLSKEI---KVGQFIGYVSEHSAYH-HGEQSLAS 746

Query: 178  SLVRMAQDF--SLRYPLIQGHGNFGS--IDADPAAAMRYTESRXXXXXXXXXXXXXXXXX 233
            +++ MAQDF  S    L++ +G FG+  +     A+ RY  +                  
Sbjct: 747  TIINMAQDFVGSNNINLLKPNGQFGTRNLGGKDHASARYIYTELNTITRCIFHEDDDKLL 806

Query: 234  XXFVPNFDNSQKEPSVLPARLPILLLNGASGIAVGMATNIPPHNLGELVDVLRVLIHNPE 293
                 N D    EP+     +P++L+NG+ GI  G ++ IP +N  +++  +R L+    
Sbjct: 807  EYL--NEDGRCIEPNWYIPVIPLVLVNGSEGIGTGWSSYIPNYNPRDIIANVRRLLSG-- 862

Query: 294  ATLQEMLEYMPGPDFPTGGVIMGNLGILEAYRTXXXXXXXXXKTEFELLDSKTKRTAIII 353
                   E M     P      G  G +E                 E ++ +T R    I
Sbjct: 863  -------ETM----VPMDPWYKGFKGTIE---RSPKEGGYVVNGSVEEINEQTFR----I 904

Query: 354  KEIPYQTNKAALVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLY 413
             E+P +       +   + +E+ +    +D R   D + + I + +K      I+   L 
Sbjct: 905  TELPVR----KWTQDYKQFLESITDGSPNDFRQNGDDATVDIEVRMKLEKIVGIMQEGLL 960

Query: 414  RLTSLQSTFSCNMVGILNGQ---PKQTGLKELLQEFLDFRCSVIERRARFKLSKAQERRH 470
            +   L S+ S N + + + +    K    +++L+EF   R    ERR +  L+       
Sbjct: 961  KKFKLTSSISTNNMHLFDAEGKIKKYDNPEQILEEFFPLRLEYYERRKKHILNN------ 1014

Query: 471  IVEGILIGFDNLDRVI 486
             +E +L+  DN  R I
Sbjct: 1015 -LEQLLLILDNKVRFI 1029


>Glyma10g11610.1 
          Length = 1490

 Score = 64.3 bits (155), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 20/180 (11%)

Query: 120 LGRALPDVRDGLKPVHRRILFAMHELGLSSKKSFKKCARVVGEVLG------KFHPHGDS 173
           L R++P + DGLKP  R+ILF   +     KK FK+    VG+ +G       +H HG+ 
Sbjct: 695 LQRSIPSMVDGLKPGQRKILFCSFK-----KKLFKEIK--VGQFIGYVSEHSAYH-HGEQ 746

Query: 174 AVYDSLVRMAQDF--SLRYPLIQGHGNFGS--IDADPAAAMRYTESRXXXXXXXXXXXXX 229
           ++  +++ MAQDF  S    L++ +G FG+  +     A+ RY  +              
Sbjct: 747 SLASTIINMAQDFVGSNNINLLKPNGQFGTRNLGGKDHASARYIYTELSTITRCIFHEDD 806

Query: 230 XXXXXXFVPNFDNSQKEPSVLPARLPILLLNGASGIAVGMATNIPPHNLGELVDVLRVLI 289
                    N D    EP+     +P++L+NG+ GI  G ++ IP +N  +++  +R L+
Sbjct: 807 DKLLEYL--NEDGRCIEPTWYIPVIPLVLVNGSEGIGTGWSSYIPNYNPRDIIANVRRLL 864