Miyakogusa Predicted Gene

Lj0g3v0002029.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1L2W3_SOYBN 1601 88.6 92.3 (tr|I1L2W3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G23230.1 1305 72.3 82.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:8244481-8251741 FORWARD LENGTH=1615
Medicago Medtr1g031910.1 1553 86.1 90.7 | mediator of RNA polymerase II transcription subunit 23 | HC | chr1:11217223-11235651 | 20130731
Soybean Glyma09g22260.1 1591 88.8 92.3  
LJGI gnl|LJGI|TC76190 904 99.6 99.6 similar to UniRef100_A7P3T5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0002029.1 length: 879 aa.
IPR021629 Mediator complex, subunit Med23
method AccNumber shortName E-value location
HMMPfam PF11573 Med23 3.7e-23 38-488
no_ID  
HMMPanther PTHR12691 FAMILY 0 1-878
HMMPanther PTHR12691:SF1 SUBFAMILY 0 1-878
Seg seg seg NA 306-323
567-584
Wolf-PSORT
Lj0g3v0002029.1	chlo 9, vacu 3, nucl 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0002029.1 Not targeted -53.384 -15.331 -2.231 80.13% -35.822