Miyakogusa Predicted Gene
- Lj0g3v0002029.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0002029.1 Non Chatacterized Hit- tr|I1L2W3|I1L2W3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,92.33,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Med23,Mediator complex, subunit Med23; seg,NULL,CUFF.118.1
(879 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23230.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator c... 1305 0.0
AT1G23230.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 1298 0.0
>AT1G23230.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator
complex subunit Med23 (InterPro:IPR021629); Has 187 Blast
hits to 184 proteins in 67 species: Archae - 0; Bacteria
- 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0;
Other Eukaryotes - 9 (source: NCBI BLink). |
chr1:8244481-8251741 FORWARD LENGTH=1615
Length = 1615
Score = 1305 bits (3378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/875 (72%), Positives = 718/875 (82%), Gaps = 6/875 (0%)
Query: 1 MVETYTRLLLIAPHSLFRSHFNHLVHKSPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 60
MVETYTRLLLI+PHS+FRSHF+ L ++ SLLSKPGVTLLVLEILNYRLLPLYRYQGKSK
Sbjct: 733 MVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 792
Query: 61 ALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVRREGKLQGPTEFTETLN 120
LMYDVTKIISALKGKRGDHR+FRLAENLC+NLI SLRDFF V+REGK GPTEFTETLN
Sbjct: 793 TLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGK--GPTEFTETLN 850
Query: 121 RATVITLAILIKTRGIADADHLLYLQNMLEQIMSTSQHTWSEKTQRHFPSVLREALSGRT 180
R T++TLAI IKTRGIAD DH++YLQ MLEQI++TSQHTWSEKT RHFPS+LRE L GR
Sbjct: 851 RITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRV 910
Query: 181 DKRSLAIQAWQQAETTVINQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGH 240
DKR L+IQAWQQAETTVINQCTQLLSPSA+P+YV TY+SHSFPQHRQYLCAGA +LM GH
Sbjct: 911 DKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGH 970
Query: 241 PENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHSLQDLMIKALASLTFF 300
ENINS NL RVLRE SPEEVT+NIYT+VDV+LHH+ ++LQQG SL+ ++ KA A+L FF
Sbjct: 971 AENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFF 1030
Query: 301 VWTNEXXXXXXXXXXXXXXXXXXHALRIVISLLDRQELQQRIKLFCLTRGHPEHWLYSGT 360
WT+E HAL I +SLL +L RIK +C RG PEHWL +
Sbjct: 1031 FWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQV 1090
Query: 361 FKRVEVQKALGNHLSGKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAVYSP 420
FKR E+QKALGNHLS KDRYP FFDDIAARLLPVIPL++YRLIEN+AM+ A+ LL +S
Sbjct: 1091 FKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSH 1150
Query: 421 LLAYYPLRFTFVRDILSYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPVMCPP 480
LAY+PLRFTFVRDIL+YFYGHLPGKL++R+L VLD+SKIPFSESFPQ IS + +CPP
Sbjct: 1151 FLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPP 1210
Query: 481 LDYFSTLLLGIVNNVIPPLHNNSKSGP----MGDASNNALRTTQNKPPAVSQSGPANASE 536
LDYF++LLL +VNNVIPPL ++S M D N++ R K P SQ GPANASE
Sbjct: 1211 LDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASE 1270
Query: 537 GQKAFYQIQDPGTYTQLVLETAVIEILSLPXXXXXXXXXXXXXXXXXXPTLIQSSNALHG 596
GQKAFYQIQDPGTYTQLVLETAVIEILSLP TLIQS N HG
Sbjct: 1271 GQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHG 1330
Query: 597 GSNGVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACG 656
+NGVGQGSVLPTSPSGGSTDS+ ASRST + GINT++F SRSGYTCQQLSCLLIQACG
Sbjct: 1331 AANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACG 1390
Query: 657 LLLAQLPSDFHSQLYLETTRIIKENWWLTDGKRSLGEIDSAVGYALLDPTWAAQDNTSTA 716
LLLAQLP DFH QLYLE R+ +E WWL DGKRS GE+DSAVGYAL+DPTWAAQDNTSTA
Sbjct: 1391 LLLAQLPPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTA 1450
Query: 717 IGNVVALLHSFFSNLPQEWLEGTNVIVNQLRPVASVAMLRIVFRIMGPLLPKLANAHALF 776
IGN+VALLH+FFSNLPQEWL+GTN I+ LRPV SVAMLR+VFRIMGPLLP+LA+ H LF
Sbjct: 1451 IGNIVALLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLF 1510
Query: 777 NKTLSSLLSILVDVFGKNSQTSIAVDASEIADLIDFLHHAIHYEGQGGSVQASSKPRADV 836
NKTL LLS LVDVFGK +QT+ V+AS+IADLIDFLHH IHYEGQGG+VQ SSKPR D+
Sbjct: 1511 NKTLMLLLSALVDVFGKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDI 1570
Query: 837 LALMGRASERLRPDIQHLLSHLNPDVNSSVYAAFH 871
LAL+GRA+E LRPD+QHLL+HL + NSS+YAA H
Sbjct: 1571 LALIGRAAETLRPDVQHLLAHLKTNPNSSIYAAAH 1605
>AT1G23230.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Mediator complex subunit
Med23 (InterPro:IPR021629). | chr1:8244481-8251741
FORWARD LENGTH=1592
Length = 1592
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/875 (72%), Positives = 717/875 (81%), Gaps = 10/875 (1%)
Query: 1 MVETYTRLLLIAPHSLFRSHFNHLVHKSPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 60
MVETYTRLLLI+PHS+FRSHF+ ++ SLLSKPGVTLLVLEILNYRLLPLYRYQGKSK
Sbjct: 714 MVETYTRLLLISPHSMFRSHFS----RNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 769
Query: 61 ALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVRREGKLQGPTEFTETLN 120
LMYDVTKIISALKGKRGDHR+FRLAENLC+NLI SLRDFF V+REGK GPTEFTETLN
Sbjct: 770 TLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGK--GPTEFTETLN 827
Query: 121 RATVITLAILIKTRGIADADHLLYLQNMLEQIMSTSQHTWSEKTQRHFPSVLREALSGRT 180
R T++TLAI IKTRGIAD DH++YLQ MLEQI++TSQHTWSEKT RHFPS+LRE L GR
Sbjct: 828 RITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRV 887
Query: 181 DKRSLAIQAWQQAETTVINQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGH 240
DKR L+IQAWQQAETTVINQCTQLLSPSA+P+YV TY+SHSFPQHRQYLCAGA +LM GH
Sbjct: 888 DKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGH 947
Query: 241 PENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHSLQDLMIKALASLTFF 300
ENINS NL RVLRE SPEEVT+NIYT+VDV+LHH+ ++LQQG SL+ ++ KA A+L FF
Sbjct: 948 AENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFF 1007
Query: 301 VWTNEXXXXXXXXXXXXXXXXXXHALRIVISLLDRQELQQRIKLFCLTRGHPEHWLYSGT 360
WT+E HAL I +SLL +L RIK +C RG PEHWL +
Sbjct: 1008 FWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQV 1067
Query: 361 FKRVEVQKALGNHLSGKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAVYSP 420
FKR E+QKALGNHLS KDRYP FFDDIAARLLPVIPL++YRLIEN+AM+ A+ LL +S
Sbjct: 1068 FKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSH 1127
Query: 421 LLAYYPLRFTFVRDILSYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPVMCPP 480
LAY+PLRFTFVRDIL+YFYGHLPGKL++R+L VLD+SKIPFSESFPQ IS + +CPP
Sbjct: 1128 FLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPP 1187
Query: 481 LDYFSTLLLGIVNNVIPPLHNNSKSGP----MGDASNNALRTTQNKPPAVSQSGPANASE 536
LDYF++LLL +VNNVIPPL ++S M D N++ R K P SQ GPANASE
Sbjct: 1188 LDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASE 1247
Query: 537 GQKAFYQIQDPGTYTQLVLETAVIEILSLPXXXXXXXXXXXXXXXXXXPTLIQSSNALHG 596
GQKAFYQIQDPGTYTQLVLETAVIEILSLP TLIQS N HG
Sbjct: 1248 GQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHG 1307
Query: 597 GSNGVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACG 656
+NGVGQGSVLPTSPSGGSTDS+ ASRST + GINT++F SRSGYTCQQLSCLLIQACG
Sbjct: 1308 AANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACG 1367
Query: 657 LLLAQLPSDFHSQLYLETTRIIKENWWLTDGKRSLGEIDSAVGYALLDPTWAAQDNTSTA 716
LLLAQLP DFH QLYLE R+ +E WWL DGKRS GE+DSAVGYAL+DPTWAAQDNTSTA
Sbjct: 1368 LLLAQLPPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTA 1427
Query: 717 IGNVVALLHSFFSNLPQEWLEGTNVIVNQLRPVASVAMLRIVFRIMGPLLPKLANAHALF 776
IGN+VALLH+FFSNLPQEWL+GTN I+ LRPV SVAMLR+VFRIMGPLLP+LA+ H LF
Sbjct: 1428 IGNIVALLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLF 1487
Query: 777 NKTLSSLLSILVDVFGKNSQTSIAVDASEIADLIDFLHHAIHYEGQGGSVQASSKPRADV 836
NKTL LLS LVDVFGK +QT+ V+AS+IADLIDFLHH IHYEGQGG+VQ SSKPR D+
Sbjct: 1488 NKTLMLLLSALVDVFGKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDI 1547
Query: 837 LALMGRASERLRPDIQHLLSHLNPDVNSSVYAAFH 871
LAL+GRA+E LRPD+QHLL+HL + NSS+YAA H
Sbjct: 1548 LALIGRAAETLRPDVQHLLAHLKTNPNSSIYAAAH 1582