Miyakogusa Predicted Gene

Lj0g3v0002029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0002029.1 Non Chatacterized Hit- tr|I1L2W3|I1L2W3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,92.33,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Med23,Mediator complex, subunit Med23; seg,NULL,CUFF.118.1
         (879 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g22260.1                                                      1591   0.0  

>Glyma09g22260.1 
          Length = 1616

 Score = 1591 bits (4120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 775/873 (88%), Positives = 806/873 (92%), Gaps = 2/873 (0%)

Query: 1    MVETYTRLLLIAPHSLFRSHFNHLVHKSPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 60
            MVETYTRLLL+APHSLFRSHFNHLV ++PSLLSKPGVTLLVLEILNYRLLPLYRYQGKSK
Sbjct: 708  MVETYTRLLLLAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSK 767

Query: 61   ALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVRREGKLQGPTEFTETLN 120
            ALMYDVTKIISA+KGKRGDHRVFRLAENLCLNLIFSLRDFFLV+REGK  GPTEFTETLN
Sbjct: 768  ALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGK--GPTEFTETLN 825

Query: 121  RATVITLAILIKTRGIADADHLLYLQNMLEQIMSTSQHTWSEKTQRHFPSVLREALSGRT 180
            R TVITLAILIKTRGIADA+HLLYLQNMLEQIM+TS HTWSEKT  HFPSVLREALSG+T
Sbjct: 826  RVTVITLAILIKTRGIADAEHLLYLQNMLEQIMATSHHTWSEKTLHHFPSVLREALSGQT 885

Query: 181  DKRSLAIQAWQQAETTVINQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGH 240
            DKRSLAIQ WQQAETTVI+QCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGH
Sbjct: 886  DKRSLAIQTWQQAETTVIHQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGH 945

Query: 241  PENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHSLQDLMIKALASLTFF 300
             ENINSGNLGRVLREFSPEEVTSNIYTMVDV+LHHMQIELQQGHS QDLM+KA AS+ FF
Sbjct: 946  AENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSSQDLMLKACASIAFF 1005

Query: 301  VWTNEXXXXXXXXXXXXXXXXXXHALRIVISLLDRQELQQRIKLFCLTRGHPEHWLYSGT 360
            VWTNE                  HALR+VISLLDR ELQQR+K FC+TRGHPEHWLYSG 
Sbjct: 1006 VWTNELLPLDILLLALIDRDDDPHALRMVISLLDRPELQQRVKHFCMTRGHPEHWLYSGI 1065

Query: 361  FKRVEVQKALGNHLSGKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAVYSP 420
            FKRVE+QKALGNHL+ KDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLA+YSP
Sbjct: 1066 FKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAMYSP 1125

Query: 421  LLAYYPLRFTFVRDILSYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPVMCPP 480
            LLAYYPLRFTFVRDIL+YFYGHLPGKLIVRILNVLDISKIPFSESFPQQIS +NPVMCPP
Sbjct: 1126 LLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISLTNPVMCPP 1185

Query: 481  LDYFSTLLLGIVNNVIPPLHNNSKSGPMGDASNNALRTTQNKPPAVSQSGPANASEGQKA 540
            LDYF+TLLLGIVNNVIPPLHNNSKSG MGDAS+N LRT Q+KPPAVSQSG ANASEGQKA
Sbjct: 1186 LDYFTTLLLGIVNNVIPPLHNNSKSGSMGDASSNTLRTAQSKPPAVSQSGSANASEGQKA 1245

Query: 541  FYQIQDPGTYTQLVLETAVIEILSLPXXXXXXXXXXXXXXXXXXPTLIQSSNALHGGSNG 600
            FYQIQDPGTYTQLVLETAVIEILSLP                  PTLIQSSNALHGGSN 
Sbjct: 1246 FYQIQDPGTYTQLVLETAVIEILSLPISASQIVQSLVQIVVNIQPTLIQSSNALHGGSNS 1305

Query: 601  VGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLA 660
            VGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLA
Sbjct: 1306 VGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLA 1365

Query: 661  QLPSDFHSQLYLETTRIIKENWWLTDGKRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNV 720
            QLPSDFHSQLYLETTRIIKENWWL DG RSLGEIDSAVGYALLDPTWAAQDNTSTAIGNV
Sbjct: 1366 QLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNV 1425

Query: 721  VALLHSFFSNLPQEWLEGTNVIVNQLRPVASVAMLRIVFRIMGPLLPKLANAHALFNKTL 780
            VALLHSFFSNLPQEWLEGTNVI+ QLRPV SVAMLRI FR+MGPLLPKLANAHALFNKTL
Sbjct: 1426 VALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFRVMGPLLPKLANAHALFNKTL 1485

Query: 781  SSLLSILVDVFGKNSQTSIAVDASEIADLIDFLHHAIHYEGQGGSVQASSKPRADVLALM 840
            SSLL+ILVDVFGKNSQTSIAVDAS+IAD+IDFLHH +HYEGQGG VQASSKPR +VLAL+
Sbjct: 1486 SSLLTILVDVFGKNSQTSIAVDASDIADIIDFLHHVVHYEGQGGPVQASSKPRPEVLALI 1545

Query: 841  GRASERLRPDIQHLLSHLNPDVNSSVYAAFHPK 873
            GRASE LRPDIQHLLSHLNPDVNSSVYAAFHPK
Sbjct: 1546 GRASESLRPDIQHLLSHLNPDVNSSVYAAFHPK 1578