Miyakogusa Predicted Gene

Lj0g3v0002029.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0002029.1 Non Chatacterized Hit- tr|I1L2W3|I1L2W3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,92.33,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Med23,Mediator complex, subunit Med23; seg,NULL,CUFF.118.1
         (2640 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76190 similar to UniRef100_A7P3T5 Cluster: Chromosome...   904   0.0  
gnl|LJGI|AV778927 weakly similar to UniRef100_A9S7Q9 Cluster: Pr...   468   e-131

>gnl|LJGI|TC76190 similar to UniRef100_A7P3T5 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (10%)
          Length = 642

 Score =  904 bits (456), Expect = 0.0
 Identities = 462/464 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2177 ctttcttcagtaatctccctcaagaatggcttgaagggaccaatgttattgtcaaccaac 2236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctttcttcagtaatctccctcaagaatggcttgaagggaccaatgttattgtcaaccaac 60

                                                                        
Query: 2237 ttcggccggtagcatccgttgcaatgttgaggatagtattccgtataatgggtccactcc 2296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttcggccggtagcatccgttgcaatgttgaggatagtattccgtataatgggtccactcc 120

                                                                        
Query: 2297 taccaaaacttgccaatgctcatgcacttttcaacaagaccctatcatcattattaagta 2356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  taccaaaacttgccaatgctcatgcacttttcaacaagaccctatcatcattattaagta 180

                                                                        
Query: 2357 tattagtggatgtatttggaaaaaactcccagacatcaattgctgttgatgcatctgaaa 2416
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181  tattagtggatgtatttggaaaaaactcccagacatccattgctgttgatgcatctgaaa 240

                                                                        
Query: 2417 tagcggatctcattgacttcctccatcatgccattcattatgaagggcagggagggtctg 2476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tagcggatctcattgacttcctccatcatgccattcattatgaagggcagggagggtctg 300

                                                                        
Query: 2477 tacaggctagcagcaaacctcgagccgatgttttggctcttatgggaagggcatcagaga 2536
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tacaggctagcagccaacctcgagccgatgttttggctcttatgggaagggcatcagaga 360

                                                                        
Query: 2537 gattacgtccagacattcaacatctgctctctcacttgaatcctgatgtgaattcttctg 2596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gattacgtccagacattcaacatctgctctctcacttgaatcctgatgtgaattcttctg 420

                                                        
Query: 2597 tttatgcggcatttcatccgaagttggtccagaatccatcttag 2640
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tttatgcggcatttcatccgaagttggtccagaatccatcttag 464


>gnl|LJGI|AV778927 weakly similar to UniRef100_A9S7Q9 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (4%)
          Length = 509

 Score =  468 bits (236), Expect = e-131
 Identities = 311/332 (93%), Gaps = 3/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2312 atgctcatgcacttttcaacaagaccctatcatcattattaagtatattagtggatgtat 2371
            |||||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 463  atgctcatgcacgtttctactagaccctatcctcattattaagtatattagtggatgtat 404

                                                                        
Query: 2372 ttggaaaaaactcccagacatca-attgctgttgatgcatctgaaatagcggatctcatt 2430
            ||||     |||||| ||| ||  ||||||||||||||||||||||||||||||||||||
Sbjct: 403  ttggtttggactccctgacctccgattgctgttgatgcatctgaaatagcggatctcatt 344

                                                                        
Query: 2431 gacttcctccatcatgccattcattatgaagggcagggagggtctgtacaggcta-gcag 2489
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 343  gacttcctccatcatgccattcactatgaagggcagggagggtctgtacaggctacgcag 284

                                                                        
Query: 2490 caaacc-tcgagccgatgttttggctcttatgggaagggcatcagagagattacgtccag 2548
            | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 283  ccaaccctcgagccgatgctttggctcttatgggaagggcatcagagagattacgtccag 224

                                                                        
Query: 2549 acattcaacatctgctctctcacttgaatcctgatgtgaattcttctgtttatgcggcat 2608
            || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223  accttccacatctgctctctcacttgaatcctgatgtgaattcttctgtttatgcggcat 164

                                            
Query: 2609 ttcatccgaagttggtccagaatccatcttag 2640
            ||||||||||||||||||||| ||||||||||
Sbjct: 163  ttcatccgaagttggtccagactccatcttag 132