VN1R1 ORF clone pFN21AE0843

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0843

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE0843 Sequence (with vector) Restriction Map

Product ID

FHC11304

Flexi Clone PID

FXC11304

ORF Sequence

DNA sequence (1059 bp)
Protein sequence (353 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529266]

Gene

KIEE0843

Symbol

VN1R1

Alias : V1RL1, VNR19I1, ZVNH1, ZVNR1

Description

vomeronasal 1 receptor 1

Original Clone ID

cp01243

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1059 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 353 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12951.1 2.6e-155 100.0 VN1R1 CCDS12862.1 9.5e-50 43.2 VN1R2 CCDS33099.1 5e-49 43.1 VN1R4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR004072 77 87 PR01534 Vomeronasal receptor IPR004072 116 130 PR01534 Vomeronasal receptor IPR004072 247 261 PR01534 Vomeronasal receptor IPR004072 261 274 PR01534 Vomeronasal receptor IPR004072 321 332 PR01534 Vomeronasal receptor HMMPfam IPR004072 74 335 PF03402 Vomeronasal receptor ProfileScan IPR017452 62 325 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 3 GDTLKLLSPLMTRYFFLLFYSTD 25 SECONDARY 23 2 51 SFLIQTGVGILGNSFLLCFYNLI 73 PRIMARY 23 3 83 TDLILSQLALANSMVLFFKGIPQ 105 SECONDARY 23 4 170 FCCLLCWAPHVLMNASVLLLVNG 192 SECONDARY 23 5 222 VLYFSPDFMSLGFMVWASGSMVF 244 SECONDARY 23 6 274 TIMVLVSSFFVFYSVHSFLTIWT 296 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065684 353 605234 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0843 Download

>KIEE0843  1059 bp
ATGGTTGGAGACACATTAAAACTTCTGTCTCCACTGATGACAAGATACTTCTTTCTGCTT
TTTTATTCTACTGATTCTTCAGACCTCAATGAAAATCAACATCCCCTAGATTTTGATGAA
ATGGCTTTTGGAAAAGTAAAATCAGGGATTAGCTTCCTCATTCAGACTGGAGTTGGGATC
CTGGGAAATTCCTTTCTCCTTTGTTTTTATAACTTAATTTTGTTCACTGGACACAAGCTG
AGACCCACGGACTTGATTCTCAGCCAACTGGCCTTGGCTAACTCCATGGTCCTTTTCTTT
AAAGGGATACCTCAGACAATGGCAGCTTTTGGATTGAAATATTTGCTGAATGACACTGGA
TGTAAGTTTGTCTTTTATTATCACAGGGTGGGCACAAGAGTTTCCCTCAGCACCATCTGC
CTTCTCAATGGATTCCAAGCCATTAAGCTCAACCCCAGTATATGCAGGTGGATGGAGATC
AAGATTAGATCCCCAAGGTTTATTGACTTCTGTTGTCTCCTCTGCTGGGCCCCCCATGTC
TTGATGAATGCATCTGTTCTTCTATTAGTGAATGGCCCACTGAATAGCAAAAACAGTAGT
GCAAAAAACAATTATGGATACTGTTCTTACAAAGCATCAAAGAGATTTAGCTCATTACAT
GCAGTCTTATATTTTTCCCCTGATTTTATGAGTTTGGGCTTCATGGTCTGGGCCAGTGGC
TCCATGGTCTTCTTCCTCTACAGACACAAGCAGCAAGTCCAACACAATCACAGCAACAGA
CTCTCCTGCAGACCTTCCCAGGAAGCCAGAGCCACACACACCATCATGGTCCTGGTGAGC
TCCTTTTTTGTTTTCTATTCAGTCCATAGTTTTCTGACAATTTGGACAACTGTAGTTGCA
AACCCAGGCCAGTGGATAGTGACCAACTCTGTGTTGGTCGCCTCATGTTTCCCAGCACGC
AGCCCTTTTGTCCTCATCATGAGTGATACTCATATCTCTCAGTTCTGTTTTGCCTGCAGG
ACAAGGAAAACACTCTTTCCTAATCTGGTTGTCATGCCA

ORF Protein

Cloned ORF protein sequence for pFN21AE0843 Download

>KIEE0843  353 aa
MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGI
LGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTG
CKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHV
LMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASG
SMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVA
NPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0843 Download

>pFN21AE0843  5764 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGTTGGAGACACATTAAAACTTCTGTCTCCACT
GATGACAAGATACTTCTTTCTGCTTTTTTATTCTACTGATTCTTCAGACCTCAATGAAAA
TCAACATCCCCTAGATTTTGATGAAATGGCTTTTGGAAAAGTAAAATCAGGGATTAGCTT
CCTCATTCAGACTGGAGTTGGGATCCTGGGAAATTCCTTTCTCCTTTGTTTTTATAACTT
AATTTTGTTCACTGGACACAAGCTGAGACCCACGGACTTGATTCTCAGCCAACTGGCCTT
GGCTAACTCCATGGTCCTTTTCTTTAAAGGGATACCTCAGACAATGGCAGCTTTTGGATT
GAAATATTTGCTGAATGACACTGGATGTAAGTTTGTCTTTTATTATCACAGGGTGGGCAC
AAGAGTTTCCCTCAGCACCATCTGCCTTCTCAATGGATTCCAAGCCATTAAGCTCAACCC
CAGTATATGCAGGTGGATGGAGATCAAGATTAGATCCCCAAGGTTTATTGACTTCTGTTG
TCTCCTCTGCTGGGCCCCCCATGTCTTGATGAATGCATCTGTTCTTCTATTAGTGAATGG
CCCACTGAATAGCAAAAACAGTAGTGCAAAAAACAATTATGGATACTGTTCTTACAAAGC
ATCAAAGAGATTTAGCTCATTACATGCAGTCTTATATTTTTCCCCTGATTTTATGAGTTT
GGGCTTCATGGTCTGGGCCAGTGGCTCCATGGTCTTCTTCCTCTACAGACACAAGCAGCA
AGTCCAACACAATCACAGCAACAGACTCTCCTGCAGACCTTCCCAGGAAGCCAGAGCCAC
ACACACCATCATGGTCCTGGTGAGCTCCTTTTTTGTTTTCTATTCAGTCCATAGTTTTCT
GACAATTTGGACAACTGTAGTTGCAAACCCAGGCCAGTGGATAGTGACCAACTCTGTGTT
GGTCGCCTCATGTTTCCCAGCACGCAGCCCTTTTGTCCTCATCATGAGTGATACTCATAT
CTCTCAGTTCTGTTTTGCCTGCAGGACAAGGAAAACACTCTTTCCTAATCTGGTTGTCAT
GCCAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT