RNF139 ORF clone pFN21AB7062

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7062

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Clone info.

Species

human

Clone Name

pFN21AB7062 Sequence (with vector) Restriction Map

Product ID

FHC02235

Flexi Clone PID

FXC02235

ORF Sequence

DNA sequence (1992 bp)
Protein sequence (664 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464690]

Gene

KIBB7062

Symbol

RNF139

Alias : HRCA1, RCA1, TRC8

Description

ring finger protein 139

Original Clone ID

cp01067

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1992 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 664 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6350.1 0 100.0 RNF139 CCDS56390.1 1.5e-37 28.9 RNF145 CCDS56391.1 1.5e-37 28.9 RNF145 CCDS56392.1 1.5e-37 28.9 RNF145 CCDS4344.1 1.5e-37 28.9 RNF145 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 547 585 PF00097 Zinc finger HMMSmart IPR011016 546 586 SM00744 Zinc finger IPR001841 547 585 SM00184 Zinc finger ProfileScan IPR001841 547 586 PS50089 Zinc finger
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 17 QVWAALEVALRVPCLYIIDAIFN 39 SECONDARY 23 2 50 CIVLQIFLRLFGVFASSIVLILS 72 PRIMARY 23 3 79 FYTYSSAFLLAATSVLVNYYASL 101 SECONDARY 23 4 125 SLWMALIVLQLTFGIGYVTLLQI 147 PRIMARY 23 5 152 SQLIILDLLVPVIGLITELPLHI 174 PRIMARY 23 6 176 ETLLFTSSLILTLNTVFVLAVK 197 PRIMARY 22 7 238 LRVFWLTRVTAQATVLMYILRMA 260 SECONDARY 23 8 284 GCDSTLTVLGMSAVISSVAHYLG 306 SECONDARY 23 9 323 LGFVAPVLFFILALQTGLSGLRP 345 SECONDARY 23 10 389 HFPVLFVSACLFILPVLLSYVLW 411 PRIMARY 23 11 423 VTAFCVELCLKVIVSLTVYTLFM 445 PRIMARY 23 12 463 YVRSTGSIIEFIFGVVMFGNGAY 485 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_009149 664 144700,603046 100.0 100.0 XP_016868491 537 144700,603046 100.0 80.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7062 Download

>KIBB7062  1992 bp
ATGGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCATCAGCAGGTCTGGGCG
GCGCTCGAAGTGGCGCTCCGGGTGCCCTGCCTTTACATCATCGACGCCATCTTCAACTCC
TACCCGGATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCTCTTT
GGTGTATTTGCATCCAGTATTGTTCTGATCTTGTCACAACGATCACTTTTCAAGTTTTAC
ACGTACAGCTCAGCCTTTCTGTTAGCTGCAACTTCAGTGTTGGTGAATTATTATGCTTCT
TTGCACATTGACTTCTATGGTGCCTACAACACGTCAGCTTTTGGAATTGAGCTGCTTCCT
CGAAAAGGTCCCTCGCTGTGGATGGCACTTATCGTTCTACAGCTAACATTTGGAATTGGA
TACGTTACACTACTCCAGATTCATTCCATCTATTCACAATTAATTATTTTGGATCTCTTG
GTTCCTGTAATAGGCTTAATCACAGAGCTACCATTACACATCAGAGAGACTTTACTGTTT
ACTTCTTCCTTGATTCTCACATTAAATACAGTGTTTGTCCTGGCAGTGAAACTGAAGTGG
TTTTATTATTCCACACGATATGTTTATCTTTTGGTGAGGCACATGTATCGAATTTACGGA
TTACAGTTATTGATGGAGGACACATGGAAGAGGATTCGTTTCCCAGACATACTACGAGTC
TTTTGGCTAACAAGAGTTACAGCTCAGGCTACAGTGTTAATGTACATCTTAAGGATGGCA
AATGAAACTGATTCCTTCTTTATTTCTTGGGATGATTTTTGGGACCTCATTTGCAATCTT
ATAATTAGTGGGTGCGATTCTACACTAACTGTACTGGGCATGAGTGCTGTAATTTCCTCA
GTAGCCCATTATTTGGGGCTTGGAATATTGGCCTTTATTGGATCAACTGAGGAAGATGAC
AGGCGTCTTGGCTTTGTTGCACCTGTTTTATTTTTTATTTTGGCTCTTCAGACTGGGTTA
AGTGGGCTAAGACCAGAAGAGAGACTTATTCGCTTAAGTAGAAACATGTGCCTTTTATTA
ACTGCAGTCCTGCATTTTATCCATGGAATGACAGACCCTGTATTAATGTCTCTCAGTGCC
TCTCATGTGTCATCTTTTCGTAGACATTTTCCTGTGCTGTTTGTCTCTGCTTGCCTGTTT
ATTCTTCCTGTCTTACTCAGTTATGTTCTTTGGCATCACTATGCACTAAATACATGGTTG
TTTGCAGTTACAGCATTTTGTGTGGAACTGTGCTTAAAAGTAATTGTTTCTCTCACTGTT
TATACGTTATTCATGATTGATGGCTACTATAATGTCCTCTGGGAAAAGCTTGACGATTAT
GTCTACTACGTTCGTTCAACAGGCAGTATTATTGAATTTATATTTGGAGTTGTAATGTTT
GGAAATGGGGCTTACACTATGATGTTTGAGTCGGGAAGTAAAATTCGGGCTTTTATGATG
TGCCTACATGCATATTTTAACATCTACTTACAAGCCAAAAATGGCTGGAAGACATTTATG
AATCGTAGGACTGCTGTGAAGAAAATTAATTCACTTCCTGAAATAAAAGGGAGCCGCTTA
CAAGAAATAAATGATGTATGTGCAATCTGCTATCATGAGTTTACAACATCTGCTCGTATT
ACACCGTGTAATCATTATTTCCATGCACTTTGCCTTCGGAAATGGCTGTACATTCAAGAT
ACTTGTCCAATGTGCCATCAGAAAGTATACATCGAAGATGATATCAAGGATAATTCAAAT
GTATCTAACAACAATGGATTTATTCCACCCAATGAAACTCCAGAGGAAGCTGTAAGAGAA
GCTGCTGCTGAATCTGACAGGGAATTGAACGAAGATGACAGTACAGATTGTGATGATGAT
GTTCAAAGAGAAAGAAATGGAGTGATTCAGCACACAGGCGCAGCAGCTGAAGAATTTAAT
GATGATACTGAC

ORF Protein

Cloned ORF protein sequence for pFN21AB7062 Download

>KIBB7062  664 aa
MAAVGPPQQQVRMAHQQVWAALEVALRVPCLYIIDAIFNSYPDSSQSRFCIVLQIFLRLF
GVFASSIVLILSQRSLFKFYTYSSAFLLAATSVLVNYYASLHIDFYGAYNTSAFGIELLP
RKGPSLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGLITELPLHIRETLLF
TSSLILTLNTVFVLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRV
FWLTRVTAQATVLMYILRMANETDSFFISWDDFWDLICNLIISGCDSTLTVLGMSAVISS
VAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLL
TAVLHFIHGMTDPVLMSLSASHVSSFRRHFPVLFVSACLFILPVLLSYVLWHHYALNTWL
FAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYYVRSTGSIIEFIFGVVMF
GNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEIKGSRL
QEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSN
VSNNNGFIPPNETPEEAVREAAAESDRELNEDDSTDCDDDVQRERNGVIQHTGAAAEEFN
DDTD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7062 Download

>pFN21AB7062  6697 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCG
GATGGCCCATCAGCAGGTCTGGGCGGCGCTCGAAGTGGCGCTCCGGGTGCCCTGCCTTTA
CATCATCGACGCCATCTTCAACTCCTACCCGGATTCCAGCCAAAGCCGGTTCTGCATCGT
GCTCCAGATCTTCCTCCGGCTCTTTGGTGTATTTGCATCCAGTATTGTTCTGATCTTGTC
ACAACGATCACTTTTCAAGTTTTACACGTACAGCTCAGCCTTTCTGTTAGCTGCAACTTC
AGTGTTGGTGAATTATTATGCTTCTTTGCACATTGACTTCTATGGTGCCTACAACACGTC
AGCTTTTGGAATTGAGCTGCTTCCTCGAAAAGGTCCCTCGCTGTGGATGGCACTTATCGT
TCTACAGCTAACATTTGGAATTGGATACGTTACACTACTCCAGATTCATTCCATCTATTC
ACAATTAATTATTTTGGATCTCTTGGTTCCTGTAATAGGCTTAATCACAGAGCTACCATT
ACACATCAGAGAGACTTTACTGTTTACTTCTTCCTTGATTCTCACATTAAATACAGTGTT
TGTCCTGGCAGTGAAACTGAAGTGGTTTTATTATTCCACACGATATGTTTATCTTTTGGT
GAGGCACATGTATCGAATTTACGGATTACAGTTATTGATGGAGGACACATGGAAGAGGAT
TCGTTTCCCAGACATACTACGAGTCTTTTGGCTAACAAGAGTTACAGCTCAGGCTACAGT
GTTAATGTACATCTTAAGGATGGCAAATGAAACTGATTCCTTCTTTATTTCTTGGGATGA
TTTTTGGGACCTCATTTGCAATCTTATAATTAGTGGGTGCGATTCTACACTAACTGTACT
GGGCATGAGTGCTGTAATTTCCTCAGTAGCCCATTATTTGGGGCTTGGAATATTGGCCTT
TATTGGATCAACTGAGGAAGATGACAGGCGTCTTGGCTTTGTTGCACCTGTTTTATTTTT
TATTTTGGCTCTTCAGACTGGGTTAAGTGGGCTAAGACCAGAAGAGAGACTTATTCGCTT
AAGTAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTTATCCATGGAATGACAGA
CCCTGTATTAATGTCTCTCAGTGCCTCTCATGTGTCATCTTTTCGTAGACATTTTCCTGT
GCTGTTTGTCTCTGCTTGCCTGTTTATTCTTCCTGTCTTACTCAGTTATGTTCTTTGGCA
TCACTATGCACTAAATACATGGTTGTTTGCAGTTACAGCATTTTGTGTGGAACTGTGCTT
AAAAGTAATTGTTTCTCTCACTGTTTATACGTTATTCATGATTGATGGCTACTATAATGT
CCTCTGGGAAAAGCTTGACGATTATGTCTACTACGTTCGTTCAACAGGCAGTATTATTGA
ATTTATATTTGGAGTTGTAATGTTTGGAAATGGGGCTTACACTATGATGTTTGAGTCGGG
AAGTAAAATTCGGGCTTTTATGATGTGCCTACATGCATATTTTAACATCTACTTACAAGC
CAAAAATGGCTGGAAGACATTTATGAATCGTAGGACTGCTGTGAAGAAAATTAATTCACT
TCCTGAAATAAAAGGGAGCCGCTTACAAGAAATAAATGATGTATGTGCAATCTGCTATCA
TGAGTTTACAACATCTGCTCGTATTACACCGTGTAATCATTATTTCCATGCACTTTGCCT
TCGGAAATGGCTGTACATTCAAGATACTTGTCCAATGTGCCATCAGAAAGTATACATCGA
AGATGATATCAAGGATAATTCAAATGTATCTAACAACAATGGATTTATTCCACCCAATGA
AACTCCAGAGGAAGCTGTAAGAGAAGCTGCTGCTGAATCTGACAGGGAATTGAACGAAGA
TGACAGTACAGATTGTGATGATGATGTTCAAAGAGAAAGAAATGGAGTGATTCAGCACAC
AGGCGCAGCAGCTGAAGAATTTAATGATGATACTGACGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT