HSH2D ORF clone pF1KE0783

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KE0783

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Clone info.

Species

human

Clone Name

pF1KE0783 Sequence (with vector) Restriction Map

Product ID

FXC03951

HaloTag Clone PID

FHC03951

ORF Sequence

DNA sequence (1056 bp)
Protein sequence (352 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528024]

Gene

KIEE0783

Symbol

HSH2D

Alias : ALX, HSH2

Description

hematopoietic SH2 domain containing, transcript variant 1

Original Clone ID

cs02283

Features of the cloned ORF sequence

Description

Length: 1056 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 352 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS74304.1 2.3e-108 100.0 HSH2D CCDS45315.1 1.7e-11 28.8 SH2D7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000980 34 48 PR00401 SH2 motif IPR000980 53 63 PR00401 SH2 motif IPR000980 98 112 PR00401 SH2 motif HMMPfam IPR000980 34 109 PF00017 SH2 motif HMMSmart IPR000980 32 115 SM00252 SH2 motif ProfileScan IPR000980 34 125 PS50001 SH2 motif
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_116244 352 608349 100.0 100.0 XP_011526688 405 608349 80.5 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0783 Download

>KIEE0783  1056 bp
ATGACAGAGGCCGGGAAGCTGCCCCTACCGCTACCCCCACGGCTGGACTGGTTTGTGCAC
ACTCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCA
AGAGAGGATGCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCCTTTCTCATCAGGGTC
AGTCACAGCCATGTGGGCTACACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCATTTC
ATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACC
TCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTG
CTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGGATCTTTTCCTC
TACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGCCTCC
CCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGTCAGCAGAGATGAACAGA
ATAACCACCAAGGAAGCCACTTCCTCCTGCCCCCCAAAATCCCCTCTTGGAGAGACCCGC
CAGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCAG
CTAAAAAGCCACCTCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACG
GTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG
GGGGACAGAGGCTACACGGATCCCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCCC
CAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATT
GAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAG
GAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAG
TACCAACAACCGCCACCCTTTGCCCCTGGGTACTGC

ORF Protein

Cloned ORF protein sequence for pF1KE0783 Download

>KIEE0783  352 aa
MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
VISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCI
EVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0783 Download

>pF1KE0783  4169 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACAGAGGCC
GGGAAGCTGCCCCTACCGCTACCCCCACGGCTGGACTGGTTTGTGCACACTCAGATGGGC
CAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATGCT
GAGAACTTGCTGGAGTCACAGCCACTGGGATCCTTTCTCATCAGGGTCAGTCACAGCCAT
GTGGGCTACACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTC
TTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGCC
CTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
TGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGGATCTTTTCCTCTACTCCAACGCA
GTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGCCTCCCCAAAGCCAGTC
CTGTGTCACCAATCAAAGGAAAGGAAGCCGTCAGCAGAGATGAACAGAATAACCACCAAG
GAAGCCACTTCCTCCTGCCCCCCAAAATCCCCTCTTGGAGAGACCCGCCAGAAACTCTGG
AGGAGCCTCAAAATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCAC
CTCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGTGATCTCAGGC
CCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCGGGGGACAGAGGC
TACACGGATCCCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCCCCAGGCACCAAAA
GACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCCA
GGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCA
GAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCG
CCACCCTTTGCCCCTGGGTACTGCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT