SNX15 ORF clone pF1KB9923

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB9923

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Clone info.

Species

human

Clone Name

pF1KB9923 Sequence (with vector) Restriction Map

Product ID

FXC03686

HaloTag Clone PID

ORF Sequence

DNA sequence (1026 bp)
Protein sequence (342 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527759]

Gene

KIBB9923

Symbol

SNX15

Alias : HSAF001435

Description

sorting nexin 15, transcript variant A

Original Clone ID

cs01623

Features of the cloned ORF sequence

Description

Length: 1026 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 342 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8089.1 2.3e-91 100.0 SNX15 CCDS8090.1 4.8e-58 74.6 SNX15 CCDS1513.1 9.5e-17 40.7 RPS6KC1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001683 11 123 PF00787 Phox homologous domain IPR007330 268 335 PF04212 MIT HMMSmart IPR001683 8 126 SM00312 Phox homologous domain IPR007330 265 342 SM00745 MIT ProfileScan IPR001683 1 130 PS50195 Phox homologous domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037438 342 605964 100.0 100.0 NP_680086 256 605964 74.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9923 Download

>KIBB9923  1026 bp
ATGTCCCGCCAGGCGAAGGATGACTTCCTGCGGCACTACACAGTGTCGGACCCCAGGACT
CACCCCAAGGGCTACACCGAGTACAAAGTAACCGCGCAGTTCATCTCAAAGAAGGACCCA
GAGGATGTCAAAGAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGA
GACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCCGCTTTCCCC
CGGGCCCAGGTGTTTGGCCGGTTTGAAGCCTCAGTGATCGAGGAGCGGCGAAAGGGGGCA
GAGGACCTGCTTCGCTTCACTGTGCACATACCTGCGCTCAACAACAGCCCCCAGCTCAAG
GAGTTCTTCCGGGGTGGGGAGGTGACCCGACCCTTGGAGGTGTCCAGGGACCTACACATC
CTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGGCTATCCCAACTGCTC
CCTGCAGAAAGGAGGGGCCTCGAGGAATTGGAGGTGCCAGTGGACCCCCCACCATCCAGC
CCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTGTGAGAGCACCGAGGAGGCATCTGGT
TCCCCTGCCCGAGGCCCCCTCACCGAGGCTGAGCTTGCCCTCTTCGACCCCTTCTCCAAG
GAAGAAGGCGCAGCCCCCAGCCCCACCCATGTGGCTGAGCTGGCAACGATGGAGGTGGAG
TCTGCAAGGCTGGACCAGGAACCCTGGGAGCCAGGAGGGCAGGAGGAGGAAGAGGATGGG
GAAGGAGGGCCCACCCCTGCCTACCTAAGCCAGGCCACAGAGCTCATCACCCAGGCCCTG
CGGGATGAGAAGGCAGGCGCTTACGCTGCTGCACTCCAGGGCTATCGAGACGGCGTGCAC
GTCTTGCTTCAGGGAGTCCCCAGTGACCCGTTGCCTGCCCGCCAGGAAGGTGTGAAGAAG
AAGGCAGCTGAGTACCTGAAGCGGGCAGAGGAGATCCTGCGCCTGCACCTGTCTCAACTC
CCACCC

ORF Protein

Cloned ORF protein sequence for pF1KB9923 Download

>KIBB9923  342 aa
MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG
DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK
EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS
PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEEGAAPSPTHVAELATMEVE
SARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALRDEKAGAYAAALQGYRDGVH
VLLQGVPSDPLPARQEGVKKKAAEYLKRAEEILRLHLSQLPP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9923 Download

>pF1KB9923  4139 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCCGCCAG
GCGAAGGATGACTTCCTGCGGCACTACACAGTGTCGGACCCCAGGACTCACCCCAAGGGC
TACACCGAGTACAAAGTAACCGCGCAGTTCATCTCAAAGAAGGACCCAGAGGATGTCAAA
GAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGAGACCTGGCCTAC
ACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCCGCTTTCCCCCGGGCCCAGGTG
TTTGGCCGGTTTGAAGCCTCAGTGATCGAGGAGCGGCGAAAGGGGGCAGAGGACCTGCTT
CGCTTCACTGTGCACATACCTGCGCTCAACAACAGCCCCCAGCTCAAGGAGTTCTTCCGG
GGTGGGGAGGTGACCCGACCCTTGGAGGTGTCCAGGGACCTACACATCCTGCCACCCCCT
CTGATCCCCACCCCGCCCCCTGATGACCCCCGGCTATCCCAACTGCTCCCTGCAGAAAGG
AGGGGCCTCGAGGAATTGGAGGTGCCAGTGGACCCCCCACCATCCAGCCCTGCCCAGGAG
GCCCTGGATCTCCTCTTTAACTGTGAGAGCACCGAGGAGGCATCTGGTTCCCCTGCCCGA
GGCCCCCTCACCGAGGCTGAGCTTGCCCTCTTCGACCCCTTCTCCAAGGAAGAAGGCGCA
GCCCCCAGCCCCACCCATGTGGCTGAGCTGGCAACGATGGAGGTGGAGTCTGCAAGGCTG
GACCAGGAACCCTGGGAGCCAGGAGGGCAGGAGGAGGAAGAGGATGGGGAAGGAGGGCCC
ACCCCTGCCTACCTAAGCCAGGCCACAGAGCTCATCACCCAGGCCCTGCGGGATGAGAAG
GCAGGCGCTTACGCTGCTGCACTCCAGGGCTATCGAGACGGCGTGCACGTCTTGCTTCAG
GGAGTCCCCAGTGACCCGTTGCCTGCCCGCCAGGAAGGTGTGAAGAAGAAGGCAGCTGAG
TACCTGAAGCGGGCAGAGGAGATCCTGCGCCTGCACCTGTCTCAACTCCCACCCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT