SOCS4 ORF clone pF1KB8830

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB8830

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Clone info.

Species

human

Clone Name

pF1KB8830 Sequence (with vector) Restriction Map

Product ID

FXC03049

HaloTag Clone PID

FHC03049

ORF Sequence

DNA sequence (1320 bp)
Protein sequence (440 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464721]

Gene

KIBB8830

Symbol

SOCS4

Alias : SOCS7

Description

suppressor of cytokine signaling 4, transcript variant 2

Original Clone ID

cp00865

Features of the cloned ORF sequence

Description

Length: 1320 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 440 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9722.1 1.8e-177 100.0 SOCS4 CCDS1830.1 9.8e-64 54.2 SOCS5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022252 58 112 PF12610 Suppressor of cytokine signalling IPR000980 287 341 PF00017 SH2 motif IPR001496 386 423 PF07525 SOCS protein HMMSmart IPR000980 284 370 SM00252 SH2 motif IPR001496 380 423 SM00253 SOCS protein IPR001496 386 422 SM00969 SOCS protein ProfileScan IPR000980 286 381 PS50001 SH2 motif IPR001496 376 425 PS50225 SOCS protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011534727 440 616337 100.0 100.0 XP_011534728 440 616337 100.0 100.0 NP_955453 440 616337 100.0 100.0 NP_543143 440 616337 100.0 100.0 NP_659198 536 607094 54.2 96.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8830 Download

>KIBB8830  1320 bp
ATGGCAGAAAATAATGAAAATATTAGTAAAAATGTAGATGTAAGGCCCAAAACTAGTCGG
AGCAGAAGTGCCGACAGAAAAGACGGTTATGTGTGGAGTGGAAAGAAGTTATCTTGGTCA
AAAAAGAGTGAGAGTTATTCAGATGCTGAGACAGTGAATGGTATAGAGAAAACCGAAGTG
TCTTTAAGGAACCAAGAAAGGAAGCACAGCTGTTCATCCATTGAGTTGGACTTAGATCAT
TCCTGTGGGCATCGATTTTTAGGCCGATCTCTTAAACAGAAACTGCAAGATGCCGTGGGG
CAGTGTTTTCCAATAAAGAATTGTAGTAGTCGGCACTCTTCAGGGCTTCCGTCTAAAAGG
AAAATTCATATCAGTGAACTCATGTTAGATAAGTGTCCTTTCCCACCTCGATCAGATTTA
GCCTTTAGGTGGCATTTTATTAAACGACACACTGCTCCTATAAATTCCAAATCAGATGAA
TGGGTAAGCACAGACTTGTCTCAGACTGAATTGAGGGATGGTCAGCTAAAACGAAGAAAT
ATGGAAGAAAATATAAACTGTTTCTCACATACCAATGTTCAGCCCTGTGTCATAACCACC
GACAATGCTTTGTGTAGAGAAGGTCCTATGACTGGCTCTGTGATGAACCTGGTTTCAAAT
AACAGTATAGAAGATAGTGATATGGATTCCGATGATGAAATTCTAACACTTTGCACAAGT
TCCAGAAAAAGAAACAAACCCAAATGGGATTTGGATGATGAAATCCTGCAGTTGGAAACA
CCTCCTAAATACCACACGCAGATTGATTATGTCCACTGTCTTGTACCAGACCTCCTTCAG
ATCAATAACAACCCATGTTACTGGGGAGTGATGGATAAATACGCAGCCGAAGCACTACTG
GAAGGAAAACCAGAGGGTACCTTTTTACTTCGAGACTCAGCACAGGAAGACTATTTATTC
TCTGTTAGTTTTAGACGCTATAGTCGTTCTCTTCATGCTAGAATTGAACAGTGGAATCAC
AACTTTAGCTTTGATGCACATGACCCCTGTGTCTTCCATTCTCCTGACATTACTGGGCTC
CTAGAACATTATAAGGACCCAAGCGCCTGTATGTTCTTTGAACCACTTCTATCCACTCCC
TTAATTCGGACTTTCCCTTTTTCCCTGCAGCATATATGCAGAACAGTTATTTGTAACTGT
ACAACTTATGATGGCATCGATGCCCTTCCAATTCCTTCTTCTATGAAATTATATCTGAAG
GAATATCATTATAAATCAAAAGTTAGAGTACTCAGGATTGATGCACCAGAACAGCAATGC

ORF Protein

Cloned ORF protein sequence for pF1KB8830 Download

>KIBB8830  440 aa
MAENNENISKNVDVRPKTSRSRSADRKDGYVWSGKKLSWSKKSESYSDAETVNGIEKTEV
SLRNQERKHSCSSIELDLDHSCGHRFLGRSLKQKLQDAVGQCFPIKNCSSRHSSGLPSKR
KIHISELMLDKCPFPPRSDLAFRWHFIKRHTAPINSKSDEWVSTDLSQTELRDGQLKRRN
MEENINCFSHTNVQPCVITTDNALCREGPMTGSVMNLVSNNSIEDSDMDSDDEILTLCTS
SRKRNKPKWDLDDEILQLETPPKYHTQIDYVHCLVPDLLQINNNPCYWGVMDKYAAEALL
EGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGL
LEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLK
EYHYKSKVRVLRIDAPEQQC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8830 Download

>pF1KB8830  4433 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAGAAAAT
AATGAAAATATTAGTAAAAATGTAGATGTAAGGCCCAAAACTAGTCGGAGCAGAAGTGCC
GACAGAAAAGACGGTTATGTGTGGAGTGGAAAGAAGTTATCTTGGTCAAAAAAGAGTGAG
AGTTATTCAGATGCTGAGACAGTGAATGGTATAGAGAAAACCGAAGTGTCTTTAAGGAAC
CAAGAAAGGAAGCACAGCTGTTCATCCATTGAGTTGGACTTAGATCATTCCTGTGGGCAT
CGATTTTTAGGCCGATCTCTTAAACAGAAACTGCAAGATGCCGTGGGGCAGTGTTTTCCA
ATAAAGAATTGTAGTAGTCGGCACTCTTCAGGGCTTCCGTCTAAAAGGAAAATTCATATC
AGTGAACTCATGTTAGATAAGTGTCCTTTCCCACCTCGATCAGATTTAGCCTTTAGGTGG
CATTTTATTAAACGACACACTGCTCCTATAAATTCCAAATCAGATGAATGGGTAAGCACA
GACTTGTCTCAGACTGAATTGAGGGATGGTCAGCTAAAACGAAGAAATATGGAAGAAAAT
ATAAACTGTTTCTCACATACCAATGTTCAGCCCTGTGTCATAACCACCGACAATGCTTTG
TGTAGAGAAGGTCCTATGACTGGCTCTGTGATGAACCTGGTTTCAAATAACAGTATAGAA
GATAGTGATATGGATTCCGATGATGAAATTCTAACACTTTGCACAAGTTCCAGAAAAAGA
AACAAACCCAAATGGGATTTGGATGATGAAATCCTGCAGTTGGAAACACCTCCTAAATAC
CACACGCAGATTGATTATGTCCACTGTCTTGTACCAGACCTCCTTCAGATCAATAACAAC
CCATGTTACTGGGGAGTGATGGATAAATACGCAGCCGAAGCACTACTGGAAGGAAAACCA
GAGGGTACCTTTTTACTTCGAGACTCAGCACAGGAAGACTATTTATTCTCTGTTAGTTTT
AGACGCTATAGTCGTTCTCTTCATGCTAGAATTGAACAGTGGAATCACAACTTTAGCTTT
GATGCACATGACCCCTGTGTCTTCCATTCTCCTGACATTACTGGGCTCCTAGAACATTAT
AAGGACCCAAGCGCCTGTATGTTCTTTGAACCACTTCTATCCACTCCCTTAATTCGGACT
TTCCCTTTTTCCCTGCAGCATATATGCAGAACAGTTATTTGTAACTGTACAACTTATGAT
GGCATCGATGCCCTTCCAATTCCTTCTTCTATGAAATTATATCTGAAGGAATATCATTAT
AAATCAAAAGTTAGAGTACTCAGGATTGATGCACCAGAACAGCAATGCGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT