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SpecieshumanProduct IDFXC11726Cloning SiteSgfI-PmeIGeneKIBB6259SymbolSLC26A3
Alias : CLD, DRADescriptionsolute carrier family 26 (anion exchanger), member 3Original Clone IDcs00859
Length: 2292 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 764 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS5748.1 0 100.0 SLC26A3 CCDS5746.1 3.9e-151 48.2 SLC26A4 CCDS5733.1 5.9e-115 39.2 SLC26A5 CCDS43630.1 6e-110 39.9 SLC26A5 CCDS43629.1 4e-94 44.8 SLC26A5
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR011547 193 471 PF00916 Sulphate transporter IPR002645 526 716 PF01740 Sulphate transporter/antisigma-factor antagonist STAS HMMTigr IPR001902 59 716 TIGR00815 Sulphate anion transporter ProfileScan IPR002645 525 720 PS50801 Sulphate transporter/antisigma-factor antagonist STAS
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 53 IVLSLFPIASWLPAYR 68 SECONDARY 16 2 73 LLSDIVSGISTGIVAVLQGLAFA 95 PRIMARY 23 3 100 IPPVYGLYASFFPAIIYLFFGTS 122 PRIMARY 23 4 127 VGPFPILSMMVGLAVSGAVSKAV 149 SECONDARY 23 5 179 AASVTVLSGIIQLAFGILRIGFV 201 PRIMARY 23 6 213 FTTAAAVHVLVSQLKFIFQLTVP 235 SECONDARY 23 7 258 NIADLVTALIVLLVVSIVKEINQ 280 PRIMARY 23 8 285 KLPVPIPIEFIMTVIAAGVSYGC 307 SECONDARY 23 9 340 VGDCFGIAMVAFAVAFSVASVYS 362 PRIMARY 23 10 373 QELIALGLGNIVCGVFRGFAGST 395 SECONDARY 23 11 417 GAIIVLIVVLAIGFLLAPLQKSV 439 PRIMARY 23 12 477 IFTIVLGLGLGLAASVAFQLLTI 499 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000102 764 126650,214700 100.0 100.0 XP_011514169 764 126650,214700 100.0 100.0 XP_005250482 780 274600,600791,605646 48.2 93.7 NP_000432 780 274600,600791,605646 48.2 93.7 NP_945350 744 604943,613865 39.2 95.4 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB6259 Download>KIBB6259 2292 bp ATGATTGAACCCTTTGGGAATCAGTATATTGTGGCCAGGCCAGTGTATTCTACAAATGCT TTTGAGGAAAATCATAAAAAGACAGGAAGACATCATAAGACATTTCTGGATCATCTCAAA GTGTGTTGTAGCTGTTCCCCACAAAAGGCCAAGAGAATTGTCCTCTCTTTGTTCCCCATA GCATCTTGGTTGCCAGCATACCGGCTTAAAGAATGGTTGCTCAGTGATATTGTTTCTGGT ATCAGCACAGGGATTGTGGCCGTACTACAAGGTTTAGCATTTGCTCTGCTGGTCGACATT CCCCCAGTCTATGGGTTGTATGCATCCTTTTTCCCAGCCATAATCTACCTTTTCTTCGGC ACTTCCAGACACATATCCGTGGGTCCGTTTCCGATTCTGAGTATGATGGTGGGACTAGCA GTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGGATTGCCT AACAACTCGAATAATTCTTCACTACTGGATGACGAGAGGGTGAGGGTGGCGGCGGCGGCA TCAGTCACAGTGCTTTCTGGAATCATCCAGTTGGCTTTTGGGATTCTGCGGATTGGATTT GTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCTGTTCAT GTTTTGGTTTCCCAACTCAAATTCATTTTTCAGTTGACAGTCCCGTCACACACTGATCCA GTTTCAATTTTCAAAGTACTATACTCTGTATTCTCACAAATAGAGAAGACTAATATTGCA GACCTGGTGACAGCTCTGATTGTCCTTTTGGTTGTATCCATTGTTAAAGAAATAAATCAG CGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATTGCA GCAGGTGTATCCTACGGCTGTGACTTTAAAAACAGGTTTAAAGTGGCTGTGGTTGGGGAC ATGAATCCTGGATTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTA GGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTC TATTCCCTCAAATACGATTATCCACTTGATGGCAATCAGGAGTTAATAGCCTTGGGACTG GGTAACATAGTCTGTGGAGTATTCAGAGGATTTGCTGGGAGTACTGCCCTCTCCAGATCA GCAGTTCAGGAGAGCACAGGAGGCAAAACACAGATTGCTGGGCTTATTGGTGCCATCATC GTGCTGATTGTCGTTCTAGCCATTGGATTTCTCCTGGCGCCTCTACAAAAGTCCGTCCTG GCAGCTTTAGCATTGGGAAACTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGGCAGA TTGTGGCGAAAGGACAAATATGATTGTTTAATTTGGATCATGACCTTCATCTTCACCATT GTCCTGGGACTCGGGTTAGGCCTGGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGTG TTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT AAGAATAAAAAAGATTATTATGATATGTATGAGCCAGAAGGAGTGAAAATTTTCAGATGT CCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTTATCGATGCTGTT GGCTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAA CTGCAGAAGCAAGGCTTGCTACAAGTGACACCAAAAGGATTTATATGTACTGTTGACACC ATAAAAGATTCTGACGAAGAGCTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATC AATACCACAGACCTGCCTTTCCACATTGACTGGAATGATGATCTTCCTCTCAACATTGAG GTCCCCAAAATCAGCCTCCACAGCCTCATTCTCGACTTTTCAGCAGTGTCCTTTCTTGAT GTTTCTTCAGTGAGGGGCCTTAAATCGATTTTGCAAGAATTTATCAGGATCAAGGTAGAT GTGTATATCGTTGGAACTGATGATGACTTCATTGAGAAGCTTAACCGGTATGAATTTTTT GATGGTGAAGTGAAAAGCTCAATATTTTTCTTAACAATCCATGATGCTGTTTTGCATATT TTGATGAAGAAAGATTACAGTACTTCAAAGTTTAATCCCAGTCAGGAAAAAGATGGAAAA ATTGATTTTACCATAAATACAAATGGAGGATTACGTAATCGGGTATATGAGGTGCCAGTT GAAACAAAATTC
Cloned ORF protein sequence for pF1KB6259 Download>KIBB6259 764 aa MIEPFGNQYIVARPVYSTNAFEENHKKTGRHHKTFLDHLKVCCSCSPQKAKRIVLSLFPI ASWLPAYRLKEWLLSDIVSGISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFG TSRHISVGPFPILSMMVGLAVSGAVSKAVPDRNATTLGLPNNSNNSSLLDDERVRVAAAA SVTVLSGIIQLAFGILRIGFVVIYLSESLISGFTTAAAVHVLVSQLKFIFQLTVPSHTDP VSIFKVLYSVFSQIEKTNIADLVTALIVLLVVSIVKEINQRFKDKLPVPIPIEFIMTVIA AGVSYGCDFKNRFKVAVVGDMNPGFQPPITPDVETFQNTVGDCFGIAMVAFAVAFSVASV YSLKYDYPLDGNQELIALGLGNIVCGVFRGFAGSTALSRSAVQESTGGKTQIAGLIGAII VLIVVLAIGFLLAPLQKSVLAALALGNLKGMLMQFAEIGRLWRKDKYDCLIWIMTFIFTI VLGLGLGLAASVAFQLLTIVFRTQFPKCSTLANIGRTNIYKNKKDYYDMYEPEGVKIFRC PSPIYFANIGFFRRKLIDAVGFSPLRILRKRNKALRKIRKLQKQGLLQVTPKGFICTVDT IKDSDEELDNNQIEVLDQPINTTDLPFHIDWNDDLPLNIEVPKISLHSLILDFSAVSFLD VSSVRGLKSILQEFIRIKVDVYIVGTDDDFIEKLNRYEFFDGEVKSSIFFLTIHDAVLHI LMKKDYSTSKFNPSQEKDGKIDFTINTNGGLRNRVYEVPVETKF
Nucleotide Sequence (with vector) for pF1KB6259 Download>pF1KB6259 5405 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATTGAACCC TTTGGGAATCAGTATATTGTGGCCAGGCCAGTGTATTCTACAAATGCTTTTGAGGAAAAT CATAAAAAGACAGGAAGACATCATAAGACATTTCTGGATCATCTCAAAGTGTGTTGTAGC TGTTCCCCACAAAAGGCCAAGAGAATTGTCCTCTCTTTGTTCCCCATAGCATCTTGGTTG CCAGCATACCGGCTTAAAGAATGGTTGCTCAGTGATATTGTTTCTGGTATCAGCACAGGG ATTGTGGCCGTACTACAAGGTTTAGCATTTGCTCTGCTGGTCGACATTCCCCCAGTCTAT GGGTTGTATGCATCCTTTTTCCCAGCCATAATCTACCTTTTCTTCGGCACTTCCAGACAC ATATCCGTGGGTCCGTTTCCGATTCTGAGTATGATGGTGGGACTAGCAGTTTCAGGAGCA GTTTCAAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGGATTGCCTAACAACTCGAAT AATTCTTCACTACTGGATGACGAGAGGGTGAGGGTGGCGGCGGCGGCATCAGTCACAGTG CTTTCTGGAATCATCCAGTTGGCTTTTGGGATTCTGCGGATTGGATTTGTAGTGATATAC CTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCTGTTCATGTTTTGGTTTCC CAACTCAAATTCATTTTTCAGTTGACAGTCCCGTCACACACTGATCCAGTTTCAATTTTC AAAGTACTATACTCTGTATTCTCACAAATAGAGAAGACTAATATTGCAGACCTGGTGACA GCTCTGATTGTCCTTTTGGTTGTATCCATTGTTAAAGAAATAAATCAGCGCTTCAAAGAC AAACTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGTGTATCC TACGGCTGTGACTTTAAAAACAGGTTTAAAGTGGCTGTGGTTGGGGACATGAATCCTGGA TTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTC GGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTATTCCCTCAAA TACGATTATCCACTTGATGGCAATCAGGAGTTAATAGCCTTGGGACTGGGTAACATAGTC TGTGGAGTATTCAGAGGATTTGCTGGGAGTACTGCCCTCTCCAGATCAGCAGTTCAGGAG AGCACAGGAGGCAAAACACAGATTGCTGGGCTTATTGGTGCCATCATCGTGCTGATTGTC GTTCTAGCCATTGGATTTCTCCTGGCGCCTCTACAAAAGTCCGTCCTGGCAGCTTTAGCA TTGGGAAACTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAG GACAAATATGATTGTTTAATTTGGATCATGACCTTCATCTTCACCATTGTCCTGGGACTC GGGTTAGGCCTGGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGTGTTCAGGACCCAA TTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTATAAGAATAAAAAA GATTATTATGATATGTATGAGCCAGAAGGAGTGAAAATTTTCAGATGTCCATCTCCTATC TACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTTATCGATGCTGTTGGCTTTAGTCCA CTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAA GGCTTGCTACAAGTGACACCAAAAGGATTTATATGTACTGTTGACACCATAAAAGATTCT GACGAAGAGCTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATCAATACCACAGAC CTGCCTTTCCACATTGACTGGAATGATGATCTTCCTCTCAACATTGAGGTCCCCAAAATC AGCCTCCACAGCCTCATTCTCGACTTTTCAGCAGTGTCCTTTCTTGATGTTTCTTCAGTG AGGGGCCTTAAATCGATTTTGCAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTT GGAACTGATGATGACTTCATTGAGAAGCTTAACCGGTATGAATTTTTTGATGGTGAAGTG AAAAGCTCAATATTTTTCTTAACAATCCATGATGCTGTTTTGCATATTTTGATGAAGAAA GATTACAGTACTTCAAAGTTTAATCCCAGTCAGGAAAAAGATGGAAAAATTGATTTTACC ATAAATACAAATGGAGGATTACGTAATCGGGTATATGAGGTGCCAGTTGAAACAAAATTC GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG CTCAT
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