RTN1 ORF clone pF1KB4713

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB4713

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB4713 Sequence (with vector) Restriction Map

Product ID

FXC10786

HaloTag Clone PID

FHC10786

ORF Sequence

DNA sequence (2328 bp)
Protein sequence (776 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI
Because the PmeI site of this clone is affected by EcoKI methylase, we strongly recommend use of EcoKI methylase-free E.coli strain for preparation of this clone.

GenBank Accession

ORF sequence is derived from [AB587373]

Gene

KIBB4713

Symbol

RTN1

Alias : NSP

Description

reticulon 1, transcript variant 1

Original Clone ID

fk16212

Features of the cloned ORF sequence

Description

Length: 2328 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 776 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9740.1 7.6e-161 100.0 RTN1 CCDS9741.1 1.6e-33 99.0 RTN1 CCDS1851.1 2.4e-25 47.6 RTN4 CCDS42683.1 5.6e-25 42.8 RTN4 CCDS1852.1 1.5e-24 33.4 RTN4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003388 590 758 PF02453 Reticulon ProfileScan IPR003388 589 776 PS50845 Reticulon
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 606 GSFLLLLFSLTQFSVVSVVAYLA 628 PRIMARY 23 2 693 LFLVQDLVDSLKFAVLMWLLTYV 715 PRIMARY 23 3 720 NGLTLLLMAVVSMFTLPVVYVKH 742 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_066959 776 600865 100.0 100.0 XP_005264491 986 604475 33.4 86.0 NP_001308792 986 604475 33.4 86.0 XP_016860008 986 604475 33.4 86.0 NP_997404 986 604475 33.4 86.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4713 Download

>KIBB4713  2328 bp
ATGGCCGCGCCGGGGGATCCGCAGGACGAGCTGCTGCCGCTGGCCGGCCCCGGGTCCCAG
TGGCTCAGGCACCGGGGGGAGGGGGAGAACGAAGCGGTGACGCCGAAAGGGGCCACGCCG
GCGCCGCAGGCTGGGGAGCCCAGCCCGGGGTTGGGCGCCAGGGCCCGGGAAGCGGCGTCG
CGGGAAGCCGGCTCGGGCCCCGCCCGGCAGTCGCCCGTTGCCATGGAAACTGCATCCACA
GGTGTGGCAGGTGTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGATGGG
GAAGGATCGTGTTACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCT
ACATATTTTACTGGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCT
GAGGAGCTGGGTACACCCGGCCCCTCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGC
TTATTTAGTTCTGATTCTGGAATAGAGATGACTCCTGCAGAGTCCACGGAAGTGAACAAG
ATCTTAGCAGACCCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTGACATAACC
AGACCCGAGGAGGTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTG
GACTTTAAGAATAAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGAC
AAACCAGCTCCTGTGGAGGGAAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTT
GCTCCATACATAGATGATCTCTCTGAAGAACAGCGCAGGGCTCCTCAGATCACCACCCCT
GTCAAAATCACACTGACGGAAATAGAACCTTCTGTTGAAACCACTACCCAAGAGAAGACC
CCTGAGAAGCAAGATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTC
TCGGAGCCTGAAGACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCA
TCTGCTGCAGAATCCCAGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATC
AAAGAAGCAAAGGGATTATCGTATGAAACCGCCGAGAACCCACGGCCGGTGGGCCAGCTG
GCCGACAGGCCCGAGGTCAAGGCCAGGTCCGGACCGCCAACCATCCCCAGCCCCCTGGAC
CACGAGGCCAGCAGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACCCC
ATGGCCGCGGAGGACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCG
CCGCCCTCGCCCGCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCC
GAGCTGGACAGCGAGCTCATCATCGAGTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGC
CCCAAGCGGGAGCAGGACTCACCCCCGATGAAGCCCAGCGCCCTGGATGCCATCCGGGAG
GAGACTGGCGTCCGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAGCCGGGT
TCCTTCCTCGACTACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGAC
GGAGCCCTGGAGCCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACTCGAGTTCC
AACCAAAGTCCTGCGGCCACAAAGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCA
CTGCTGTTTCTCAATAAGCAAAAAGCTATTGACCTGTTGTATTGGCGGGACATCAAGCAG
ACGGGCATCGTGTTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTGACCCAGTTCAGCGTG
GTGAGCGTCGTGGCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGCATC
TACAAGTCTGTTTTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTCAAGGCCTAC
TTGGAGCTTGAGATCACCCTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAG
TTCTACGTGAACAGCACACTTAAGGAACTGAGGAGGCTCTTCCTTGTCCAGGACCTGGTG
GATTCCTTAAAATTTGCAGTCCTGATGTGGCTCCTGACCTACGTTGGCGCTCTCTTCAAT
GGCCTGACCCTGCTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTGTAGTGTATGTT
AAGCACCAGGCACAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTT
GTGGCAAAGATTCAGGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAG

ORF Protein

Cloned ORF protein sequence for pF1KB4713 Download

>KIBB4713  776 aa
MAAPGDPQDELLPLAGPGSQWLRHRGEGENEAVTPKGATPAPQAGEPSPGLGARAREAAS
REAGSGPARQSPVAMETASTGVAGVSSAMDHTFSTTSKDGEGSCYTSLISDICYPPQEDS
TYFTGILQKENGHVTISESPEELGTPGPSLPDVPGIESRGLFSSDSGIEMTPAESTEVNK
ILADPLDQMKAEAYKYIDITRPEEVKHQEQHHPELEDKDLDFKNKDTDISIKPEGVREPD
KPAPVEGKIIKDHLLEESTFAPYIDDLSEEQRRAPQITTPVKITLTEIEPSVETTTQEKT
PEKQDICLKPSPDTVPTVTVSEPEDDSPGSITPPSSGTEPSAAESQGKGSISEDELITAI
KEAKGLSYETAENPRPVGQLADRPEVKARSGPPTIPSPLDHEASSAESGDSEIELVSEDP
MAAEDALPSGYVSFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEES
PKREQDSPPMKPSALDAIREETGVRAEERAPSRRGLAEPGSFLDYPSTEPQPGPELPPGD
GALEPETPMLPRKPEEDSSSNQSPAATKGPGPLGPGAPPPLLFLNKQKAIDLLYWRDIKQ
TGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAY
LELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFN
GLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4713 Download

>pF1KB4713  5441 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCGCGCCG
GGGGATCCGCAGGACGAGCTGCTGCCGCTGGCCGGCCCCGGGTCCCAGTGGCTCAGGCAC
CGGGGGGAGGGGGAGAACGAAGCGGTGACGCCGAAAGGGGCCACGCCGGCGCCGCAGGCT
GGGGAGCCCAGCCCGGGGTTGGGCGCCAGGGCCCGGGAAGCGGCGTCGCGGGAAGCCGGC
TCGGGCCCCGCCCGGCAGTCGCCCGTTGCCATGGAAACTGCATCCACAGGTGTGGCAGGT
GTTTCCAGTGCCATGGACCACACCTTCTCAACAACATCAAAAGATGGGGAAGGATCGTGT
TACACATCTCTCATTTCTGACATCTGCTATCCACCTCAGGAGGATTCTACATATTTTACT
GGAATTCTTCAGAAGGAAAATGGCCACGTCACCATTTCAGAGAGCCCTGAGGAGCTGGGT
ACACCCGGCCCCTCCTTACCAGATGTGCCTGGGATAGAGTCTCGTGGCTTATTTAGTTCT
GATTCTGGAATAGAGATGACTCCTGCAGAGTCCACGGAAGTGAACAAGATCTTAGCAGAC
CCTCTGGACCAGATGAAAGCAGAGGCCTATAAATACATTGACATAACCAGACCCGAGGAG
GTGAAGCACCAAGAACAACATCACCCCGAGCTGGAAGATAAAGACTTGGACTTTAAGAAT
AAAGACACTGACATCTCAATTAAACCTGAAGGAGTCCGTGAACCTGACAAACCAGCTCCT
GTGGAGGGAAAAATCATCAAGGACCATTTATTGGAAGAATCCACATTTGCTCCATACATA
GATGATCTCTCTGAAGAACAGCGCAGGGCTCCTCAGATCACCACCCCTGTCAAAATCACA
CTGACGGAAATAGAACCTTCTGTTGAAACCACTACCCAAGAGAAGACCCCTGAGAAGCAA
GATATATGTCTAAAGCCAAGTCCTGACACAGTCCCCACTGTCACTGTCTCGGAGCCTGAA
GACGACAGCCCAGGATCTATCACCCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAA
TCCCAGGGGAAAGGCAGCATCTCCGAGGATGAGCTGATCACCGCCATCAAAGAAGCAAAG
GGATTATCGTATGAAACCGCCGAGAACCCACGGCCGGTGGGCCAGCTGGCCGACAGGCCC
GAGGTCAAGGCCAGGTCCGGACCGCCAACCATCCCCAGCCCCCTGGACCACGAGGCCAGC
AGCGCGGAGTCGGGGGACTCAGAGATCGAGCTGGTGTCCGAGGACCCCATGGCCGCGGAG
GACGCGCTGCCCTCAGGCTATGTGAGCTTTGGCCACGTGGGCGGCCCGCCGCCCTCGCCC
GCCTCGCCATCCATCCAGTACAGCATCCTGAGGGAGGAGCGCGAGGCCGAGCTGGACAGC
GAGCTCATCATCGAGTCGTGCGACGCCTCCTCGGCCTCGGAGGAGAGCCCCAAGCGGGAG
CAGGACTCACCCCCGATGAAGCCCAGCGCCCTGGATGCCATCCGGGAGGAGACTGGCGTC
CGGGCCGAGGAGCGTGCGCCAAGCCGGCGGGGCCTGGCCGAGCCGGGTTCCTTCCTCGAC
TACCCCTCAACTGAGCCCCAGCCTGGCCCCGAGCTGCCCCCTGGAGACGGAGCCCTGGAG
CCTGAGACGCCCATGTTGCCACGGAAGCCTGAAGAAGACTCGAGTTCCAACCAAAGTCCT
GCGGCCACAAAGGGCCCTGGGCCTCTAGGTCCTGGCGCCCCGCCCCCACTGCTGTTTCTC
AATAAGCAAAAAGCTATTGACCTGTTGTATTGGCGGGACATCAAGCAGACGGGCATCGTG
TTTGGGAGTTTCCTGCTGCTGCTCTTCTCCCTGACCCAGTTCAGCGTGGTGAGCGTCGTG
GCCTACCTGGCCCTGGCCGCACTCTCAGCCACCATCAGTTTCCGCATCTACAAGTCTGTT
TTACAAGCAGTGCAGAAAACCGACGAAGGCCACCCTTTCAAGGCCTACTTGGAGCTTGAG
ATCACCCTTTCTCAGGAGCAGATTCAGAAGTACACGGACTGCCTGCAGTTCTACGTGAAC
AGCACACTTAAGGAACTGAGGAGGCTCTTCCTTGTCCAGGACCTGGTGGATTCCTTAAAA
TTTGCAGTCCTGATGTGGCTCCTGACCTACGTTGGCGCTCTCTTCAATGGCCTGACCCTG
CTGCTCATGGCTGTGGTTTCAATGTTTACTCTACCTGTAGTGTATGTTAAGCACCAGGCA
CAGATTGACCAATATCTGGGACTTGTGAGGACTCACATAAATGCTGTTGTGGCAAAGATT
CAGGCTAAAATCCCAGGCGCTAAGAGGCACGCTGAGGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT