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SpecieshumanProduct IDFXC11473Cloning SiteSgfI-PmeIGeneKIBB3655SymbolSLC11A2
Alias : AHMIO1, DCT1, DMT1, NRAMP2Descriptionsolute carrier family 11 (proton-coupled divalent metal ion transporter), member 2, transcript variant 4Original Clone IDhk00381
Length: 1683 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 561 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS8805.1 0 100.0 SLC11A2 CCDS53793.1 0 100.0 SLC11A2 CCDS53791.1 0 99.8 SLC11A2 CCDS53792.1 0 100.0 SLC11A2 CCDS2415.1 4.6e-156 63.6 SLC11A1
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001046 149 175 PR00447 Natural resistance-associated macrophage protein IPR001046 179 198 PR00447 Natural resistance-associated macrophage protein IPR001046 204 225 PR00447 Natural resistance-associated macrophage protein IPR001046 256 279 PR00447 Natural resistance-associated macrophage protein IPR001046 383 402 PR00447 Natural resistance-associated macrophage protein IPR001046 411 428 PR00447 Natural resistance-associated macrophage protein IPR001046 443 462 PR00447 Natural resistance-associated macrophage protein HMMPfam IPR001046 90 473 PF01566 Natural resistance-associated macrophage protein HMMTigr IPR001046 68 467 TIGR01197 Natural resistance-associated macrophage protein
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 105 LWILLLATLVGLLLQRLAARLGV 127 PRIMARY 23 2 140 QYPKVPRVILWLMVELAIIGSDM 162 PRIMARY 23 3 170 IAINLLSVGRIPLWGGVLITIAD 192 PRIMARY 23 4 207 LEAFFGFLITIMALTFGYEY 226 SECONDARY 20 5 299 ESCIALFVSFIINVFVVSVFAEA 321 PRIMARY 23 6 360 GVVLGCYFGPAALYIWAVGILAA 382 PRIMARY 23 7 412 VVLTRSIAIIPTLLVAVFQDVEH 434 PRIMARY 23 8 443 NVLQSLQLPFALIPILTFTSLRP 465 SECONDARY 23 9 476 WRIAGGILVLIICSINMYFVVVY 498 PRIMARY 23 10 511 AAVVSVAYLGFVFYLGWQCLIAL 533 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000608 561 206100,600523 100.0 100.0 NP_001167600 561 206100,600523 100.0 100.0 NP_001167599 561 206100,600523 100.0 100.0 NP_001167596 590 206100,600523 100.0 100.0 NP_001167601 557 206100,600523 99.8 98.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB3655 Download>KIBB3655 1683 bp ATGGTGCTGGGTCCTGAACAGAAGATGTCAGATGACAGTGTTTCTGGAGATCATGGGGAG TCTGCCAGTCTTGGTAACATCAACCCTGCCTATAGTAATCCCTCTCTTTCACAGTCCCCT GGGGACTCAGAGGAGTACTTCGCCACTTACTTTAATGAGAAGATCTCCATTCCTGAGGAG GAGTACTCTTGTTTTAGCTTTCGTAAACTCTGGGCTTTCACCGGACCAGGTTTTCTTATG AGCATTGCCTACCTGGATCCAGGAAATATTGAATCCGATTTGCAGTCTGGAGCAGTGGCT GGATTTAAGTTGCTCTGGATCCTTCTGTTGGCCACCCTTGTGGGGCTGCTGCTCCAGCGG CTTGCAGCTAGACTGGGAGTGGTTACTGGGCTGCATCTTGCTGAAGTATGTCACCGTCAG TATCCCAAGGTCCCACGAGTCATCCTGTGGCTGATGGTGGAGTTGGCTATCATCGGCTCA GACATGCAAGAAGTCATTGGCTCAGCCATTGCTATCAATCTTCTGTCTGTAGGAAGAATT CCTCTGTGGGGTGGCGTTCTCATCACCATTGCAGATACTTTTGTATTTCTCTTCTTGGAC AAATATGGCTTGCGGAAGCTAGAAGCATTTTTTGGCTTTCTCATCACTATTATGGCCCTC ACATTTGGATATGAGTATGTTACAGTGAAACCCAGCCAGAGCCAGGTACTCAAGGGCATG TTCGTACCATCCTGTTCAGGCTGTCGCACTCCACAGATTGAACAGGCTGTGGGCATCGTG GGAGCTGTCATCATGCCACACAACATGTACCTGCATTCTGCCTTAGTCAAGTCTAGACAG GTAAACCGGAACAATAAGCAGGAAGTTCGAGAAGCCAATAAGTACTTTTTCATTGAATCC TGCATTGCACTCTTTGTTTCCTTCATCATCAATGTCTTTGTTGTCTCAGTCTTTGCTGAA GCATTTTTTGGGAAAACCAACGAGCAGGTGGTTGAAGTCTGTACAAATACCAGCAGTCCT CATGCTGGCCTCTTTCCTAAAGATAACTCGACACTGGCTGTGGACATCTACAAAGGGGGT GTTGTGCTGGGATGTTACTTTGGGCCTGCTGCACTCTACATTTGGGCAGTGGGGATCCTG GCTGCAGGACAGAGCTCCACCATGACAGGAACCTATTCTGGCCAGTTTGTCATGGAGGGA TTCCTGAACCTAAAGTGGTCACGCTTTGCCCGAGTGGTTCTGACTCGCTCTATTGCCATC ATCCCCACTCTGCTTGTTGCTGTCTTCCAAGATGTAGAGCATCTAACAGGGATGAATGAC TTTCTGAATGTTCTACAGAGCTTACAGCTTCCCTTTGCTCTCATACCCATCCTCACATTT ACGAGCTTGCGGCCAGTAATGAGTGACTTTGCCAATGGACTAGGCTGGCGGATTGCAGGA GGAATCTTGGTCCTTATCATCTGTTCCATCAATATGTACTTTGTAGTGGTTTATGTCCGG GACCTAGGGCATGTGGCATTATATGTGGTGGCTGCTGTGGTCAGCGTGGCTTATCTGGGC TTTGTGTTCTACTTGGGTTGGCAATGTTTGATTGCACTGGGCATGTCCTTCCTGGACTGT GGGCATACGGTAAGCATCTCTAAAGGCCTGCTGACAGAAGAAGCCACCCGTGGCTACGTT AAA
Cloned ORF protein sequence for pF1KB3655 Download>KIBB3655 561 aa MVLGPEQKMSDDSVSGDHGESASLGNINPAYSNPSLSQSPGDSEEYFATYFNEKISIPEE EYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQR LAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRI PLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLKGM FVPSCSGCRTPQIEQAVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIES CIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNSTLAVDIYKGG VVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAI IPTLLVAVFQDVEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAG GILVLIICSINMYFVVVYVRDLGHVALYVVAAVVSVAYLGFVFYLGWQCLIALGMSFLDC GHTVSISKGLLTEEATRGYVK
Nucleotide Sequence (with vector) for pF1KB3655 Download>pF1KB3655 4796 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGCTGGGT CCTGAACAGAAGATGTCAGATGACAGTGTTTCTGGAGATCATGGGGAGTCTGCCAGTCTT GGTAACATCAACCCTGCCTATAGTAATCCCTCTCTTTCACAGTCCCCTGGGGACTCAGAG GAGTACTTCGCCACTTACTTTAATGAGAAGATCTCCATTCCTGAGGAGGAGTACTCTTGT TTTAGCTTTCGTAAACTCTGGGCTTTCACCGGACCAGGTTTTCTTATGAGCATTGCCTAC CTGGATCCAGGAAATATTGAATCCGATTTGCAGTCTGGAGCAGTGGCTGGATTTAAGTTG CTCTGGATCCTTCTGTTGGCCACCCTTGTGGGGCTGCTGCTCCAGCGGCTTGCAGCTAGA CTGGGAGTGGTTACTGGGCTGCATCTTGCTGAAGTATGTCACCGTCAGTATCCCAAGGTC CCACGAGTCATCCTGTGGCTGATGGTGGAGTTGGCTATCATCGGCTCAGACATGCAAGAA GTCATTGGCTCAGCCATTGCTATCAATCTTCTGTCTGTAGGAAGAATTCCTCTGTGGGGT GGCGTTCTCATCACCATTGCAGATACTTTTGTATTTCTCTTCTTGGACAAATATGGCTTG CGGAAGCTAGAAGCATTTTTTGGCTTTCTCATCACTATTATGGCCCTCACATTTGGATAT GAGTATGTTACAGTGAAACCCAGCCAGAGCCAGGTACTCAAGGGCATGTTCGTACCATCC TGTTCAGGCTGTCGCACTCCACAGATTGAACAGGCTGTGGGCATCGTGGGAGCTGTCATC ATGCCACACAACATGTACCTGCATTCTGCCTTAGTCAAGTCTAGACAGGTAAACCGGAAC AATAAGCAGGAAGTTCGAGAAGCCAATAAGTACTTTTTCATTGAATCCTGCATTGCACTC TTTGTTTCCTTCATCATCAATGTCTTTGTTGTCTCAGTCTTTGCTGAAGCATTTTTTGGG AAAACCAACGAGCAGGTGGTTGAAGTCTGTACAAATACCAGCAGTCCTCATGCTGGCCTC TTTCCTAAAGATAACTCGACACTGGCTGTGGACATCTACAAAGGGGGTGTTGTGCTGGGA TGTTACTTTGGGCCTGCTGCACTCTACATTTGGGCAGTGGGGATCCTGGCTGCAGGACAG AGCTCCACCATGACAGGAACCTATTCTGGCCAGTTTGTCATGGAGGGATTCCTGAACCTA AAGTGGTCACGCTTTGCCCGAGTGGTTCTGACTCGCTCTATTGCCATCATCCCCACTCTG CTTGTTGCTGTCTTCCAAGATGTAGAGCATCTAACAGGGATGAATGACTTTCTGAATGTT CTACAGAGCTTACAGCTTCCCTTTGCTCTCATACCCATCCTCACATTTACGAGCTTGCGG CCAGTAATGAGTGACTTTGCCAATGGACTAGGCTGGCGGATTGCAGGAGGAATCTTGGTC CTTATCATCTGTTCCATCAATATGTACTTTGTAGTGGTTTATGTCCGGGACCTAGGGCAT GTGGCATTATATGTGGTGGCTGCTGTGGTCAGCGTGGCTTATCTGGGCTTTGTGTTCTAC TTGGGTTGGCAATGTTTGATTGCACTGGGCATGTCCTTCCTGGACTGTGGGCATACGGTA AGCATCTCTAAAGGCCTGCTGACAGAAGAAGCCACCCGTGGCTACGTTAAAGTTTAAACG AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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