OR9K1P ORF clone FXC11288

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Flexi ORF Clone FXC11288

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Clone info.

Species

human

Clone Name

pF1KE0817 Sequence (with vector) Restriction Map

Product ID

FXC11288

HaloTag Clone PID

FHC11288

ORF Sequence

DNA sequence (762 bp)
Protein sequence (254 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529250]

Gene

KIEE0817

Symbol

OR9K1P

Alias : OR12-4

Description

olfactory receptor, family 9, subfamily K, member 1 pseudogene

Original Clone ID

cp01217

Features of the cloned ORF sequence

Description

Length: 762 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 254 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31814.1 1.9e-60 74.0 OR9K2 CCDS7949.1 5.1e-36 47.6 OR5I1 CCDS31711.1 1.5e-34 45.9 OR8B12 CCDS31529.1 1.7e-34 47.4 OR8J1 CCDS4657.1 1.7e-34 46.6 OR5V1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 29 53 PR00237 GPCR IPR000276 62 83 PR00237 GPCR IPR000725 95 106 PR00245 Olfactory receptor IPR000276 107 129 PR00237 GPCR IPR000725 132 144 PR00245 Olfactory receptor IPR000725 179 195 PR00245 Olfactory receptor IPR000276 202 225 PR00237 GPCR IPR000725 239 248 PR00245 Olfactory receptor HMMPfam IPR000276 44 235 PF00001 GPCR ProfileScan IPR017452 44 254 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 23 RPEFYILLFFLFLLIYSMVLLGN 45 PRIMARY 23 2 98 AGCVAQLFLFALFIVTEGFVLAA 120 PRIMARY 23 3 159 SILQVSVTFSVSFCASRVIAHFY 181 SECONDARY 23 4 205 LSVIIILPTIVVIIVSYLYIVSS 227 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 47.6 96.9 NP_001004729 311 615702 44.0 98.4 NP_003688 314 608492 45.3 97.2 NP_036492 312 603232 41.2 98.4 XP_011520809 312 603232 41.2 98.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0817 Download

>KIEE0817  762 bp
ATGGGTGACAAGGGAACAGGCAACCATTCAGATGTAACTGATTTCATTCTTGAAGGCTTC
AGGGTCCGCCCAGAGTTCTACATTCTCCTCTTCTTCCTGTTCCTGCTGATCTATAGCATG
GTTCTTTTGGGGAACATTAGTGTGATGACAATCATTGTAACTGATTCCCAGCTGAACACA
CCAATGTATTTTTTTCTAGGCAACCTCTCCTTCATTGACGTCTCCTACTCCACTGTTATT
GCTCCTAAAGCCATGGCCCACTTCCTGTCTGAAAAAAAGACAGTCTCTTTTGCAGGTTGT
GTTGCCCAGTTATTCCTTTTTGCCCTGTTCATTGTAACAGAGGGGTTTGTCCTGGCAGCC
ATGGCCTATGACCGCTTCAGTGCCATCTGCAATCCTCTTCTTCATAGTGTTCACATGTCA
AGACGCCTCTGCACTCAGTTGGTTGCTGGTTCTTATTTCTGTGGCTGGGCCAGTTCCATC
CTCCAAGTCAGTGTAACATTCTCAGTGTCCTTCTGTGCTTCCAGAGTCATTGCTCACTTC
TACTGTGATTCTTATCAAATTGAAAAGATTTCCTGTTCTAATCTCTTTGTCAATAAGATG
GTATCTCTGAGTTTGAGTGTCATCATTATTTTGCCTACAATTGTTGTTATTATAGTATCT
TACCTGTATATTGTATCCTCAGTCTTGAAGATCCCCTCCAGTGAAGGGAGAAAGAAAGAC
TTTTCCACTTGCAGCTCCCATCTGGGTGTTGTAAGTTTGCTC

ORF Protein

Cloned ORF protein sequence for pF1KE0817 Download

>KIEE0817  254 aa
MGDKGTGNHSDVTDFILEGFRVRPEFYILLFFLFLLIYSMVLLGNISVMTIIVTDSQLNT
PMYFFLGNLSFIDVSYSTVIAPKAMAHFLSEKKTVSFAGCVAQLFLFALFIVTEGFVLAA
MAYDRFSAICNPLLHSVHMSRRLCTQLVAGSYFCGWASSILQVSVTFSVSFCASRVIAHF
YCDSYQIEKISCSNLFVNKMVSLSLSVIIILPTIVVIIVSYLYIVSSVLKIPSSEGRKKD
FSTCSSHLGVVSLL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0817 Download

>pF1KE0817  3875 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGTGACAAG
GGAACAGGCAACCATTCAGATGTAACTGATTTCATTCTTGAAGGCTTCAGGGTCCGCCCA
GAGTTCTACATTCTCCTCTTCTTCCTGTTCCTGCTGATCTATAGCATGGTTCTTTTGGGG
AACATTAGTGTGATGACAATCATTGTAACTGATTCCCAGCTGAACACACCAATGTATTTT
TTTCTAGGCAACCTCTCCTTCATTGACGTCTCCTACTCCACTGTTATTGCTCCTAAAGCC
ATGGCCCACTTCCTGTCTGAAAAAAAGACAGTCTCTTTTGCAGGTTGTGTTGCCCAGTTA
TTCCTTTTTGCCCTGTTCATTGTAACAGAGGGGTTTGTCCTGGCAGCCATGGCCTATGAC
CGCTTCAGTGCCATCTGCAATCCTCTTCTTCATAGTGTTCACATGTCAAGACGCCTCTGC
ACTCAGTTGGTTGCTGGTTCTTATTTCTGTGGCTGGGCCAGTTCCATCCTCCAAGTCAGT
GTAACATTCTCAGTGTCCTTCTGTGCTTCCAGAGTCATTGCTCACTTCTACTGTGATTCT
TATCAAATTGAAAAGATTTCCTGTTCTAATCTCTTTGTCAATAAGATGGTATCTCTGAGT
TTGAGTGTCATCATTATTTTGCCTACAATTGTTGTTATTATAGTATCTTACCTGTATATT
GTATCCTCAGTCTTGAAGATCCCCTCCAGTGAAGGGAGAAAGAAAGACTTTTCCACTTGC
AGCTCCCATCTGGGTGTTGTAAGTTTGCTCGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT