OR9K1P ORF clone FHC11288

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Halotag ORF Clone FHC11288

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Clone info.

Species

human

Clone Name

pFN21AE0817 Sequence (with vector) Restriction Map

Product ID

FHC11288

Flexi Clone PID

FXC11288

ORF Sequence

DNA sequence (762 bp)
Protein sequence (254 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529250]

Gene

KIEE0817

Symbol

OR9K1P

Alias : OR12-4

Description

olfactory receptor, family 9, subfamily K, member 1 pseudogene

Original Clone ID

cp01217

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 762 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 254 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31814.1 1.9e-60 74.0 OR9K2 CCDS7949.1 5.1e-36 47.6 OR5I1 CCDS31711.1 1.5e-34 45.9 OR8B12 CCDS31529.1 1.7e-34 47.4 OR8J1 CCDS4657.1 1.7e-34 46.6 OR5V1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 29 53 PR00237 GPCR IPR000276 62 83 PR00237 GPCR IPR000725 95 106 PR00245 Olfactory receptor IPR000276 107 129 PR00237 GPCR IPR000725 132 144 PR00245 Olfactory receptor IPR000725 179 195 PR00245 Olfactory receptor IPR000276 202 225 PR00237 GPCR IPR000725 239 248 PR00245 Olfactory receptor HMMPfam IPR000276 44 235 PF00001 GPCR ProfileScan IPR017452 44 254 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 23 RPEFYILLFFLFLLIYSMVLLGN 45 PRIMARY 23 2 98 AGCVAQLFLFALFIVTEGFVLAA 120 PRIMARY 23 3 159 SILQVSVTFSVSFCASRVIAHFY 181 SECONDARY 23 4 205 LSVIIILPTIVVIIVSYLYIVSS 227 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 47.6 96.9 NP_001004729 311 615702 44.0 98.4 NP_003688 314 608492 45.3 97.2 NP_036492 312 603232 41.2 98.4 XP_011520809 312 603232 41.2 98.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0817 Download

>KIEE0817  762 bp
ATGGGTGACAAGGGAACAGGCAACCATTCAGATGTAACTGATTTCATTCTTGAAGGCTTC
AGGGTCCGCCCAGAGTTCTACATTCTCCTCTTCTTCCTGTTCCTGCTGATCTATAGCATG
GTTCTTTTGGGGAACATTAGTGTGATGACAATCATTGTAACTGATTCCCAGCTGAACACA
CCAATGTATTTTTTTCTAGGCAACCTCTCCTTCATTGACGTCTCCTACTCCACTGTTATT
GCTCCTAAAGCCATGGCCCACTTCCTGTCTGAAAAAAAGACAGTCTCTTTTGCAGGTTGT
GTTGCCCAGTTATTCCTTTTTGCCCTGTTCATTGTAACAGAGGGGTTTGTCCTGGCAGCC
ATGGCCTATGACCGCTTCAGTGCCATCTGCAATCCTCTTCTTCATAGTGTTCACATGTCA
AGACGCCTCTGCACTCAGTTGGTTGCTGGTTCTTATTTCTGTGGCTGGGCCAGTTCCATC
CTCCAAGTCAGTGTAACATTCTCAGTGTCCTTCTGTGCTTCCAGAGTCATTGCTCACTTC
TACTGTGATTCTTATCAAATTGAAAAGATTTCCTGTTCTAATCTCTTTGTCAATAAGATG
GTATCTCTGAGTTTGAGTGTCATCATTATTTTGCCTACAATTGTTGTTATTATAGTATCT
TACCTGTATATTGTATCCTCAGTCTTGAAGATCCCCTCCAGTGAAGGGAGAAAGAAAGAC
TTTTCCACTTGCAGCTCCCATCTGGGTGTTGTAAGTTTGCTC

ORF Protein

Cloned ORF protein sequence for pFN21AE0817 Download

>KIEE0817  254 aa
MGDKGTGNHSDVTDFILEGFRVRPEFYILLFFLFLLIYSMVLLGNISVMTIIVTDSQLNT
PMYFFLGNLSFIDVSYSTVIAPKAMAHFLSEKKTVSFAGCVAQLFLFALFIVTEGFVLAA
MAYDRFSAICNPLLHSVHMSRRLCTQLVAGSYFCGWASSILQVSVTFSVSFCASRVIAHF
YCDSYQIEKISCSNLFVNKMVSLSLSVIIILPTIVVIIVSYLYIVSSVLKIPSSEGRKKD
FSTCSSHLGVVSLL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0817 Download

>pFN21AE0817  5467 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGTGACAAGGGAACAGGCAACCATTCAGATGT
AACTGATTTCATTCTTGAAGGCTTCAGGGTCCGCCCAGAGTTCTACATTCTCCTCTTCTT
CCTGTTCCTGCTGATCTATAGCATGGTTCTTTTGGGGAACATTAGTGTGATGACAATCAT
TGTAACTGATTCCCAGCTGAACACACCAATGTATTTTTTTCTAGGCAACCTCTCCTTCAT
TGACGTCTCCTACTCCACTGTTATTGCTCCTAAAGCCATGGCCCACTTCCTGTCTGAAAA
AAAGACAGTCTCTTTTGCAGGTTGTGTTGCCCAGTTATTCCTTTTTGCCCTGTTCATTGT
AACAGAGGGGTTTGTCCTGGCAGCCATGGCCTATGACCGCTTCAGTGCCATCTGCAATCC
TCTTCTTCATAGTGTTCACATGTCAAGACGCCTCTGCACTCAGTTGGTTGCTGGTTCTTA
TTTCTGTGGCTGGGCCAGTTCCATCCTCCAAGTCAGTGTAACATTCTCAGTGTCCTTCTG
TGCTTCCAGAGTCATTGCTCACTTCTACTGTGATTCTTATCAAATTGAAAAGATTTCCTG
TTCTAATCTCTTTGTCAATAAGATGGTATCTCTGAGTTTGAGTGTCATCATTATTTTGCC
TACAATTGTTGTTATTATAGTATCTTACCTGTATATTGTATCCTCAGTCTTGAAGATCCC
CTCCAGTGAAGGGAGAAAGAAAGACTTTTCCACTTGCAGCTCCCATCTGGGTGTTGTAAG
TTTGCTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT