OR1J2 ORF clone FXC06226

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Flexi ORF Clone FXC06226

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Clone info.

Species

human

Clone Name

pF1KB7211 Sequence (with vector) Restriction Map

Product ID

FXC06226

HaloTag Clone PID

FHC06226

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528201]

Gene

KIBB7211

Symbol

OR1J2

Alias : HG152, HSA5, OR1J3, OR1J5, OR9-19, OST044

Description

olfactory receptor, family 1, subfamily J, member 2

Original Clone ID

oc00427

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35121.1 3.1e-79 100.0 OR1J2 CCDS35122.1 1.2e-61 77.9 OR1J4 CCDS35120.1 1.7e-59 75.0 OR1J1 CCDS11024.1 1.5e-49 61.3 OR1E1 CCDS10496.1 4.1e-44 56.8 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000276 140 161 PR00237 GPCR IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 FFTLFLGMYLTTVLGNLLIMLLI 49 PRIMARY 23 2 134 VIMREELCVFLVAVSWILSCASS 156 PRIMARY 23 3 205 VVITLPFMCILVSYGYIGATILR 227 PRIMARY 23 4 246 SVVSLYYGSIFGQYLFPTVSSSI 268 SECONDARY 23 5 270 KDVIVALMYTVVTPMLNPFIYSL 292 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 56.8 99.0 NP_036492 312 603232 56.8 99.0 XP_011520808 322 603232 56.8 99.0 NP_001005191 312 611538 53.2 98.4 NP_002539 312 164342 48.9 98.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7211 Download

>KIBB7211  939 bp
ATGAGCCCTGAGAACCAGAGCAGCGTGTCCGAGTTCCTCCTTCTGGGCCTCCCCATCCGG
CCAGAGCAGCAGGCTGTGTTCTTCACCCTGTTCCTGGGCATGTACCTGACCACGGTGCTG
GGGAACCTGCTCATCATGCTGCTCATCCAGCTGGACTCTCACCTTCACACCCCCATGTAC
TTCTTCCTCAGCCACTTGGCTCTCACTGACATCTCCTTTTCATCTGTCACTGTCCCTAAG
ATGCTGATGGACATGCGGACTAAGTACAAATCGATCCTCTATGAGGAATGCATTTCTCAG
ATGTATTTTTTTATATTTTTTACTGACCTGGACAGCTTCCTTATTACATCAATGGCATAT
GACCGATATGTTGCCATATGTCACCCTCTCCACTACACTGTCATCATGAGGGAAGAGCTC
TGTGTCTTCTTAGTGGCTGTATCTTGGATTCTGTCTTGTGCCAGCTCCCTCTCTCACACC
CTTCTCCTGACCCGGCTGTCTTTCTGTGCTGCGAACACCATCCCCCATGTCTTCTGTGAC
CTTGCTGCCCTGCTCAAGCTGTCCTGCTCAGATATCTTCCTCAATGAGCTGGTCATGTTC
ACAGTAGGGGTGGTGGTCATTACCCTGCCATTCATGTGTATCCTGGTATCATATGGCTAC
ATTGGGGCCACCATCCTGAGGGTCCCTTCAACCAAAGGGATCCACAAAGCATTGTCCACA
TGTGGCTCCCATCTCTCTGTGGTGTCTCTCTATTATGGGTCAATATTTGGCCAGTACCTT
TTCCCGACTGTAAGCAGTTCTATTGACAAGGATGTCATTGTGGCTCTCATGTACACGGTG
GTCACACCCATGTTGAACCCCTTTATCTACAGCCTTAGGAACAGGGACATGAAAGAGGCC
CTTGGGAAACTCTTCAGTAGAGCAACATTTTTCTCTTGG

ORF Protein

Cloned ORF protein sequence for pF1KB7211 Download

>KIBB7211  313 aa
MSPENQSSVSEFLLLGLPIRPEQQAVFFTLFLGMYLTTVLGNLLIMLLIQLDSHLHTPMY
FFLSHLALTDISFSSVTVPKMLMDMRTKYKSILYEECISQMYFFIFFTDLDSFLITSMAY
DRYVAICHPLHYTVIMREELCVFLVAVSWILSCASSLSHTLLLTRLSFCAANTIPHVFCD
LAALLKLSCSDIFLNELVMFTVGVVVITLPFMCILVSYGYIGATILRVPSTKGIHKALST
CGSHLSVVSLYYGSIFGQYLFPTVSSSIDKDVIVALMYTVVTPMLNPFIYSLRNRDMKEA
LGKLFSRATFFSW

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7211 Download

>pF1KB7211  4052 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCCCTGAG
AACCAGAGCAGCGTGTCCGAGTTCCTCCTTCTGGGCCTCCCCATCCGGCCAGAGCAGCAG
GCTGTGTTCTTCACCCTGTTCCTGGGCATGTACCTGACCACGGTGCTGGGGAACCTGCTC
ATCATGCTGCTCATCCAGCTGGACTCTCACCTTCACACCCCCATGTACTTCTTCCTCAGC
CACTTGGCTCTCACTGACATCTCCTTTTCATCTGTCACTGTCCCTAAGATGCTGATGGAC
ATGCGGACTAAGTACAAATCGATCCTCTATGAGGAATGCATTTCTCAGATGTATTTTTTT
ATATTTTTTACTGACCTGGACAGCTTCCTTATTACATCAATGGCATATGACCGATATGTT
GCCATATGTCACCCTCTCCACTACACTGTCATCATGAGGGAAGAGCTCTGTGTCTTCTTA
GTGGCTGTATCTTGGATTCTGTCTTGTGCCAGCTCCCTCTCTCACACCCTTCTCCTGACC
CGGCTGTCTTTCTGTGCTGCGAACACCATCCCCCATGTCTTCTGTGACCTTGCTGCCCTG
CTCAAGCTGTCCTGCTCAGATATCTTCCTCAATGAGCTGGTCATGTTCACAGTAGGGGTG
GTGGTCATTACCCTGCCATTCATGTGTATCCTGGTATCATATGGCTACATTGGGGCCACC
ATCCTGAGGGTCCCTTCAACCAAAGGGATCCACAAAGCATTGTCCACATGTGGCTCCCAT
CTCTCTGTGGTGTCTCTCTATTATGGGTCAATATTTGGCCAGTACCTTTTCCCGACTGTA
AGCAGTTCTATTGACAAGGATGTCATTGTGGCTCTCATGTACACGGTGGTCACACCCATG
TTGAACCCCTTTATCTACAGCCTTAGGAACAGGGACATGAAAGAGGCCCTTGGGAAACTC
TTCAGTAGAGCAACATTTTTCTCTTGGGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT