ZSCAN9 ORF clone FXC06024

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Flexi ORF Clone FXC06024

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Clone info.

Species

human

Clone Name

pF1KB7952 Sequence (with vector) Restriction Map

Product ID

FXC06024

HaloTag Clone PID

FHC06024

ORF Sequence

DNA sequence (1182 bp)
Protein sequence (394 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587454]

Gene

KIBB7952

Symbol

ZSCAN9

Alias : PRD51, ZNF193

Description

zinc finger and SCAN domain containing 9, transcript variant 2

Original Clone ID

cs00452

Features of the cloned ORF sequence

Description

Length: 1182 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 394 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4646.1 5.6e-96 100.0 ZSCAN9 CCDS56407.1 3.9e-49 88.0 ZSCAN9 CCDS47393.1 1.2e-46 54.8 ZSCAN23 CCDS4649.1 6.6e-40 51.2 ZSCAN31 CCDS4644.1 1.1e-36 50.3 ZSCAN16 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 48 140 PF02023 Transcription regulator SCAN IPR007087 254 276 PF00096 Zinc finger IPR007087 282 304 PF00096 Zinc finger IPR007087 310 332 PF00096 Zinc finger IPR007087 338 360 PF00096 Zinc finger HMMSmart IPR003309 48 160 SM00431 Transcription regulator SCAN IPR015880 254 276 SM00355 Zinc finger IPR015880 282 304 SM00355 Zinc finger IPR015880 310 332 SM00355 Zinc finger IPR015880 338 360 SM00355 Zinc finger IPR015880 366 388 SM00355 Zinc finger ProfileScan IPR003309 52 134 PS50804 Transcription regulator SCAN IPR007087 254 281 PS50157 Zinc finger IPR007087 282 309 PS50157 Zinc finger IPR007087 310 337 PS50157 Zinc finger IPR007087 338 365 PS50157 Zinc finger IPR007087 366 389 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016866756 394 602246 100.0 100.0 NP_001186409 394 602246 100.0 100.0 NP_006290 394 602246 100.0 100.0 XP_011513180 526 602246 100.0 100.0 NP_001186408 445 602246 88.0 95.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7952 Download

>KIBB7952  1182 bp
ATGAATACAAACTCAAAGGAGGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATGGGAA
GAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTG
AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTAC
CAAGAGACCCCTGGACCAAGGGAGGCTCTTACTCGACTCCAGGAACTTTGCTACCAGTGG
TTGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCTGGTGCTGGAGCAGTTT
CTATCCATTCTGCCCAAGGAGCTCCAGGGCTGGGTGAGGGAACACTGTCCAGAGAGTGGA
GAAGAGGCTGTGATTTTGCTGGAGGATCTGGAGAGAGAGCTCGATGAACCACAACATGAG
ATGGTGGCCCACAGACACAGACAAGAAGTCCTCTGTAAAGAGATGGTGCCTCTAGCAGAG
CAGACACCACTGACCCTTCAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGACTCTGCT
CAGAAGTGCCATTCTATTGGAGAGACAGATGAAGTAACCAAGACTGAGGACAGAGAGTTG
GTGCTAAGGAAAGACTGTCCTAAGATAGTGGAACCACATGGGAAAATGTTTAATGAGCAG
ACCTGGGAGGTATCACAGCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGG
ATAGAGAGGCAGTGGGGAAACCTCTTAGGAGAGGGGCAACACAAATGTGATGAATGTGGG
AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACATCAAAGAATTCATACTGGAGAAAGA
CCTTATGAATGTAATGAATGTGGGAAAGCCTTCAGTCGAAGTTCTGGTCTTTTTAATCAC
CGAGGAATCCACAATATACAGAAACGGTACCACTGCAAGGAGTGTGGGAAGGTCTTCAGT
CAGAGTGCGGGTCTTATCCAGCATCAGAGAATCCACAAAGGAGAAAAGCCGTATCAGTGC
AGCCAGTGCAGTAAGAGCTACAGTCGGCGTTCATTTCTCATTGAACATCAGAGAAGCCAC
ACAGGGGAGCGACCTCACCAGTGCATTGAATGTGGGAAAAGCTTTAATCGACACTGCAAC
CTCATTCGCCATCAGAAGATCCACACAGTGGCTGAGCTGGTC

ORF Protein

Cloned ORF protein sequence for pF1KB7952 Download

>KIBB7952  394 aa
MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7952 Download

>pF1KB7952  4295 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAATACAAAC
TCAAAGGAGGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTGACA
ATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAAT
CCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTACCAAGAGACCCCT
GGACCAAGGGAGGCTCTTACTCGACTCCAGGAACTTTGCTACCAGTGGTTGAGGCCACAT
GTGAGCACAAAGGAGCAGATTTTGGATCTGCTGGTGCTGGAGCAGTTTCTATCCATTCTG
CCCAAGGAGCTCCAGGGCTGGGTGAGGGAACACTGTCCAGAGAGTGGAGAAGAGGCTGTG
ATTTTGCTGGAGGATCTGGAGAGAGAGCTCGATGAACCACAACATGAGATGGTGGCCCAC
AGACACAGACAAGAAGTCCTCTGTAAAGAGATGGTGCCTCTAGCAGAGCAGACACCACTG
ACCCTTCAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCAT
TCTATTGGAGAGACAGATGAAGTAACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAA
GACTGTCCTAAGATAGTGGAACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTA
TCACAGCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCAG
TGGGGAAACCTCTTAGGAGAGGGGCAACACAAATGTGATGAATGTGGGAAGAGCTTTACT
CAGAGCTCAGGTCTCATTCGACATCAAAGAATTCATACTGGAGAAAGACCTTATGAATGT
AATGAATGTGGGAAAGCCTTCAGTCGAAGTTCTGGTCTTTTTAATCACCGAGGAATCCAC
AATATACAGAAACGGTACCACTGCAAGGAGTGTGGGAAGGTCTTCAGTCAGAGTGCGGGT
CTTATCCAGCATCAGAGAATCCACAAAGGAGAAAAGCCGTATCAGTGCAGCCAGTGCAGT
AAGAGCTACAGTCGGCGTTCATTTCTCATTGAACATCAGAGAAGCCACACAGGGGAGCGA
CCTCACCAGTGCATTGAATGTGGGAAAAGCTTTAATCGACACTGCAACCTCATTCGCCAT
CAGAAGATCCACACAGTGGCTGAGCTGGTCGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT