DUSP13 ORF clone FXC04838

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Flexi ORF Clone FXC04838

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Clone info.

Species

human

Clone Name

pF1KB6344 Sequence (with vector) Restriction Map

Product ID

FXC04838

HaloTag Clone PID

FHC04838

ORF Sequence

DNA sequence (873 bp)
Protein sequence (291 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463584]

Gene

KIBB6344

Symbol

DUSP13

Alias : BEDP, DUSP13A, DUSP13B, MDSP, SKRP4, TMDP

Description

dual specificity phosphatase 13, transcript variant 3

Original Clone ID

cs00944

Features of the cloned ORF sequence

Description

Length: 873 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 291 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31224.1 1.7e-75 91.4 DUSP13 CCDS7346.1 1.6e-74 99.5 DUSP13 CCDS31223.1 5.5e-32 48.9 DUPD1 CCDS6092.1 8e-31 47.1 DUSP26 CCDS53542.1 4.4e-26 45.7 DUSP13 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020405 140 151 PR01909 Dual specificity phosphatase IPR020417 143 155 PR01908 Dual specificity phosphatase IPR020417 160 171 PR01908 Dual specificity phosphatase IPR020405 160 169 PR01909 Dual specificity phosphatase IPR020417 192 201 PR01908 Dual specificity phosphatase IPR020405 192 203 PR01909 Dual specificity phosphatase IPR020417 208 219 PR01908 Dual specificity phosphatase IPR020405 212 221 PR01909 Dual specificity phosphatase HMMPfam IPR000340 146 281 PF00782 Dual specificity phosphatase HMMSmart IPR020422 138 283 SM00195 Dual specificity phosphatase ProfileScan IPR020422 138 285 PS50054 Dual specificity phosphatase IPR000387 207 265 PS50056 Protein-tyrosine/Dual-specificity phosphatase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 GLCHFATLALILLVLLEALAQAD 24 PRIMARY 23 2 33 RGVGPRACYSIWLLLAPTPPLSH 55 SECONDARY 23 3 203 FDLSVYFLPVARYIRAALSVPQG 225 SECONDARY 23 4 229 VHCAMGVSRSATLVLAFLMIYEN 251 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001307771 291 613191 99.3 100.0 NP_001007274 291 613191 99.3 100.0 XP_005269944 291 613191 99.3 100.0 XP_011538155 327 613191 99.3 100.0 XP_005269940 417 613191 99.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6344 Download

>KIBB6344  873 bp
ATGGGGCTCTGCCACTTTGCCACCCTGGCACTGATCCTGCTGGTGCTGCTGGAGGCTCTG
GCCCAGGCGGACACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCCTAGAGCCTGC
TACTCCATCTGGCTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCA
CAGAAACAGCATCAAGTGTGCGGAGACAGGCGGCTGAAAGCCGGCAGCACGAACTGCCCG
TCAGAGAAGTGCACAGCCTGGGCCAGATACTCCCACAGGATGGACTCACTGCAGAAGCAG
GACCTCCGGAGGCCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACA
TTGGCTTCGCTGCAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGAT
GAGGTCTGGCCCAGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTG
ATCCAGCTGGGAATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACA
GGTGCCAAATTCTACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGATGACAAC
CCCTTCTTCGACCTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTC
AGTGTTCCCCAAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCTCTGCCACA
CTTGTCCTGGCCTTCCTCATGATCTATGAGAACATGACGCTGGTAGAGGCCATCCAGACG
GTGCAGGCCCACCGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTG
GACAACCGACTGGGGCGGGAGACGGGGCGGTTC

ORF Protein

Cloned ORF protein sequence for pF1KB6344 Download

>KIBB6344  291 aa
MGLCHFATLALILLVLLEALAQADTQKMVEAQRGVGPRACYSIWLLLAPTPPLSHCLQSP
QKQHQVCGDRRLKAGSTNCPSEKCTAWARYSHRMDSLQKQDLRRPKIHGAVQASPYQPPT
LASLQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDT
GAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSAT
LVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLRQLQVLDNRLGRETGRF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6344 Download

>pF1KB6344  3986 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGGCTCTGC
CACTTTGCCACCCTGGCACTGATCCTGCTGGTGCTGCTGGAGGCTCTGGCCCAGGCGGAC
ACACAGAAGATGGTGGAAGCCCAGCGTGGGGTCGGCCCTAGAGCCTGCTACTCCATCTGG
CTCCTCCTGGCGCCTACACCCCCTCTCAGCCACTGTCTTCAGTCTCCACAGAAACAGCAT
CAAGTGTGCGGAGACAGGCGGCTGAAAGCCGGCAGCACGAACTGCCCGTCAGAGAAGTGC
ACAGCCTGGGCCAGATACTCCCACAGGATGGACTCACTGCAGAAGCAGGACCTCCGGAGG
CCCAAGATCCATGGGGCAGTCCAGGCATCTCCCTACCAGCCGCCCACATTGGCTTCGCTG
CAGCGCTTGCTGTGGGTCCGTCAGGCTGCCACACTGAACCATATCGATGAGGTCTGGCCC
AGCCTCTTCCTGGGAGATGCGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGA
ATCACCCACGTTGTGAATGCCGCTGCAGGCAAGTTCCAGGTGGACACAGGTGCCAAATTC
TACCGTGGAATGTCCCTGGAGTACTATGGCATCGAGGCGGATGACAACCCCTTCTTCGAC
CTCAGTGTCTACTTTCTGCCTGTTGCTCGATACATCCGAGCTGCCCTCAGTGTTCCCCAA
GGCCGCGTGCTGGTACACTGTGCCATGGGGGTAAGCCGCTCTGCCACACTTGTCCTGGCC
TTCCTCATGATCTATGAGAACATGACGCTGGTAGAGGCCATCCAGACGGTGCAGGCCCAC
CGCAATATCTGCCCTAACTCAGGCTTCCTCCGGCAGCTCCAGGTTCTGGACAACCGACTG
GGGCGGGAGACGGGGCGGTTCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT