SNRNP70 ORF clone FXC02168

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Flexi ORF Clone FXC02168

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Clone info.

Species

human

Clone Name

pF1KB5169 Sequence (with vector) Restriction Map

Product ID

FXC02168

HaloTag Clone PID

FHC02168

Original Clone PID

ORK02168

ORF Sequence

DNA sequence (1311 bp)
Protein sequence (437 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463266]

Gene

KIBB5169

Symbol

SNRNP70

Alias : RNPU1Z, RPU1, SNRP70, Snp1, U1-70K, U170K, U1AP, U1RNP

Description

small nuclear ribonucleoprotein 70kDa (U1), transcript variant 1

Original Clone ID

bm00851

Features of the cloned ORF sequence

Description

Length: 1311 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 437 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12756.1 2.1e-86 100.0 SNRNP70 CCDS74417.1 3e-55 97.9 SNRNP70 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022023 1 95 PF12220 U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal IPR000504 105 174 PF00076 RNA recognition motif domain HMMSmart IPR000504 104 177 SM00360 RNA recognition motif domain ProfileScan IPR000504 103 181 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003080 437 180740 100.0 100.0 NP_001287998 428 180740 97.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5169 Download

>KIBB5169  1311 bp
ATGACCCAGTTCCTGCCGCCCAACCTTCTGGCCCTCTTTGCCCCCCGTGACCCTATTCCA
TACCTGCCACCCCTGGAGAAACTGCCACATGAAAAACACCACAATCAACCTTATTGTGGC
ATTGCGCCGTACATTCGAGAGTTTGAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCT
GAAACCCGAGAGGAGCGCATGGAGAGGAAAAGACGGGAAAAGATTGAGCGGCGACAGCAA
GAAGTGGAGACAGAGCTTAAAATGTGGGACCCTCACAATGATCCCAATGCTCAGGGGGAT
GCCTTCAAGACTCTCTTCGTGGCGAGAGTGAATTATGACACAACAGAATCCAAGCTCCGG
AGAGAGTTTGAGGTGTACGGACCTATCAAAAGAATACACATGGTCTACAGTAAGCGGTCA
GGAAAGCCCCGTGGCTATGCCTTCATCGAGTACGAACACGAGCGAGACATGCACTCCGCT
TACAAACACGCAGATGGCAAGAAGATTGATGGCAGGAGGGTCCTTGTGGACGTGGAGAGG
GGCCGAACCGTGAAGGGCTGGAGGCCCCGGCGGCTAGGAGGAGGCCTCGGTGGTACCAGA
AGAGGAGGGGCTGATGTGAACATCCGGCATTCAGGCCGCGATGACACCTCCCGCTACGAT
GAGAGGCCCGGCCCCTCCCCGCTTCCGCACAGGGACCGGGACCGGGACCGTGAGCGGGAG
CGCAGAGAGCGGAGCCGGGAGCGAGACAAGGAGCGAGAACGGCGACGCTCCCGCTCCCGG
GACCGGCGGAGGCGCTCACGGAGTCGCGACAAGGAGGAGCGGAGGCGCTCCAGGGAGCGG
AGCAAGGACAAGGACCGGGACCGGAAGCGGCGAAGCAGCCGGAGTCGGGAGCGGGCCCGG
CGGGAGCGGGAGCGCAAGGAGGAGCTGCGTGGCGGCGGTGGCGACATGGCGGAGCCCTCC
GAGGCGGGTGACGCGCCCCCTGATGATGGGCCTCCAGGGGAGCTCGGGCCTGACGGCCCT
GACGGTCCAGAGGAAAAGGGCCGGGATCGTGACCGGGAGCGACGGCGGAGCCACCGGAGC
GAGCGCGAGCGGCGCCGGGACCGGGATCGTGACCGTGACCGTGACCGCGAGCACAAACGG
GGGGAGCGGGGCAGTGAGCGGGGCAGGGATGAGGCCCGAGGTGGGGGCGGTGGCCAGGAC
AACGGGCTGGAGGGTCTGGGCAACGACAGCCGAGACATGTACATGGAGTCTGAGGGCGGC
GACGGCTACCTGGCTCCGGAGAATGGGTATTTGATGGAGGCTGCGCCGGAG

ORF Protein

Cloned ORF protein sequence for pF1KB5169 Download

>KIBB5169  437 aa
MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA
ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE
RRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERAR
RERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRS
ERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYMESEGG
DGYLAPENGYLMEAAPE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5169 Download

>pF1KB5169  4424 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACCCAGTTC
CTGCCGCCCAACCTTCTGGCCCTCTTTGCCCCCCGTGACCCTATTCCATACCTGCCACCC
CTGGAGAAACTGCCACATGAAAAACACCACAATCAACCTTATTGTGGCATTGCGCCGTAC
ATTCGAGAGTTTGAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCTGAAACCCGAGAG
GAGCGCATGGAGAGGAAAAGACGGGAAAAGATTGAGCGGCGACAGCAAGAAGTGGAGACA
GAGCTTAAAATGTGGGACCCTCACAATGATCCCAATGCTCAGGGGGATGCCTTCAAGACT
CTCTTCGTGGCGAGAGTGAATTATGACACAACAGAATCCAAGCTCCGGAGAGAGTTTGAG
GTGTACGGACCTATCAAAAGAATACACATGGTCTACAGTAAGCGGTCAGGAAAGCCCCGT
GGCTATGCCTTCATCGAGTACGAACACGAGCGAGACATGCACTCCGCTTACAAACACGCA
GATGGCAAGAAGATTGATGGCAGGAGGGTCCTTGTGGACGTGGAGAGGGGCCGAACCGTG
AAGGGCTGGAGGCCCCGGCGGCTAGGAGGAGGCCTCGGTGGTACCAGAAGAGGAGGGGCT
GATGTGAACATCCGGCATTCAGGCCGCGATGACACCTCCCGCTACGATGAGAGGCCCGGC
CCCTCCCCGCTTCCGCACAGGGACCGGGACCGGGACCGTGAGCGGGAGCGCAGAGAGCGG
AGCCGGGAGCGAGACAAGGAGCGAGAACGGCGACGCTCCCGCTCCCGGGACCGGCGGAGG
CGCTCACGGAGTCGCGACAAGGAGGAGCGGAGGCGCTCCAGGGAGCGGAGCAAGGACAAG
GACCGGGACCGGAAGCGGCGAAGCAGCCGGAGTCGGGAGCGGGCCCGGCGGGAGCGGGAG
CGCAAGGAGGAGCTGCGTGGCGGCGGTGGCGACATGGCGGAGCCCTCCGAGGCGGGTGAC
GCGCCCCCTGATGATGGGCCTCCAGGGGAGCTCGGGCCTGACGGCCCTGACGGTCCAGAG
GAAAAGGGCCGGGATCGTGACCGGGAGCGACGGCGGAGCCACCGGAGCGAGCGCGAGCGG
CGCCGGGACCGGGATCGTGACCGTGACCGTGACCGCGAGCACAAACGGGGGGAGCGGGGC
AGTGAGCGGGGCAGGGATGAGGCCCGAGGTGGGGGCGGTGGCCAGGACAACGGGCTGGAG
GGTCTGGGCAACGACAGCCGAGACATGTACATGGAGTCTGAGGGCGGCGACGGCTACCTG
GCTCCGGAGAATGGGTATTTGATGGAGGCTGCGCCGGAGGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT