SYT4 ORF clone FXC00217

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC00217

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KA1342 Sequence (with vector) Restriction Map

Product ID

FXC00217

HaloTag Clone PID

FHC00217

ORF Sequence

DNA sequence (1275 bp)
Protein sequence (425 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385452]

Gene

KIAA1342

Symbol

SYT4

Alias : HsT1192

Description

synaptotagmin IV

Original Clone ID

fj00418

Features of the cloned ORF sequence

Description

Length: 1275 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 425 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11922.1 2.5e-156 100.0 SYT4 CCDS1122.1 3.4e-81 53.0 SYT11 CCDS58139.1 1.5e-40 37.8 SYT7 CCDS73298.1 3.2e-40 39.9 SYT7 CCDS31577.1 5.1e-40 37.5 SYT7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001565 157 172 PR00399 Synaptotagmin IPR001565 172 185 PR00399 Synaptotagmin IPR001565 229 244 PR00399 Synaptotagmin IPR001565 249 259 PR00399 Synaptotagmin HMMPfam IPR000008 171 257 PF00168 C2 calcium-dependent membrane targeting IPR000008 304 391 PF00168 C2 calcium-dependent membrane targeting HMMSmart IPR000008 169 273 SM00239 C2 calcium-dependent membrane targeting IPR000008 303 417 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 170 258 PS50004 C2 membrane targeting protein IPR018029 302 392 PS50004 C2 membrane targeting protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 15 PTVVGIFSAFGLVFTVSLFAWIC 37 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065834 425 600103 100.0 100.0 XP_005245071 430 608741 53.3 99.8 NP_689493 431 608741 53.0 99.8 XP_016856248 434 608741 52.9 99.8 NP_001238994 478 604146 37.8 90.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1342 Download

>KIAA1342  1275 bp
ATGGCTCCGATCACCACCAGCCGGGAAGAATTTGATGAAATCCCCACAGTGGTGGGGATC
TTCAGTGCATTTGGCCTGGTCTTCACAGTCTCTCTCTTTGCATGGATCTGCTGTCAGAGA
AAATCATCCAAGTCTAACAAGACTCCTCCATACAAGTTTGTGCATGTGCTTAAGGGAGTT
GATATTTACCCTGAAAACCTAAATAGCAAAAAGAAGTTTGGAGCAGATGATAAAAATGAA
GTAAAGAATAAGCCAGCTGTGCCAAAGAATTCATTGCATCTGGATCTTGAAAAGAGAGAT
CTCAATGGCAATTTTCCCAAAACCAACCTCAAACCTGGCAGTCCTTCTGATCTGGAGAAT
GCAACCCCGAAGCTCTTTTTAGAAGGGGAAAAAGAGTCAGTTTCCCCTGAGAGTTTAAAG
TCCAGCACTTCCCTTACTTCAGAAGAGAAACAAGAGAAGCTGGGAACTCTCTTCTTCTCC
TTAGAATACAACTTCGAGAGAAAAGCATTTGTGGTCAATATCAAGGAAGCCCGTGGCTTG
CCAGCCATGGATGAGCAGTCGATGACCTCTGACCCATATATCAAAATGACGATCCTCCCA
GAGAAGAAGCATAAAGTGAAAACTAGAGTGCTGAGAAAAACCTTGGATCCAGCTTTTGAT
GAGACCTTTACATTCTATGGGATACCCTACACCCAAATCCAAGAATTGGCCTTGCACTTC
ACAATTTTGAGTTTTGACAGGTTTTCAAGAGATGATATCATTGGGGAAGTTCTAATTCCT
CTCTCGGGAATTGAATTATCTGAAGGAAAAATGTTAATGAATAGAGAGATCATCAAGAGA
AATGTTAGGAAGTCTTCAGGACGGGGTGAGTTACTGATCTCTCTCTGCTATCAGTCCACC
ACAAACACTCTAACTGTGGTTGTCTTAAAAGCTCGACATCTGCCTAAATCTGATGTGTCC
GGACTTTCAGATCCCTATGTCAAAGTGAACCTGTACCATGCCAAAAAGAGAATCTCCAAG
AAGAAGACTCATGTGAAGAAATGCACCCCCAATGCAGTGTTCAATGAGCTGTTTGTCTTT
GATATTCCTTGTGAGGGCCTTGAAGATATAAGTGTTGAATTTTTGGTTTTGGATTCTGAA
AGGGGGTCCCGAAATGAGGTAATCGGGCAGTTAGTCTTGGGTGCAGCAGCAGAAGGAACT
GGTGGAGAGCACTGGAAAGAGATCTGTGACTACCCCAGGAGACAAATTGCCAAGTGGCAC
GTGCTCTGTGATGGT

ORF Protein

Cloned ORF protein sequence for pF1KA1342 Download

>KIAA1342  425 aa
MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGV
DIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLNGNFPKTNLKPGSPSDLEN
ATPKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFSLEYNFERKAFVVNIKEARGL
PAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHF
TILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIKRNVRKSSGRGELLISLCYQST
TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVF
DIPCEGLEDISVEFLVLDSERGSRNEVIGQLVLGAAAEGTGGEHWKEICDYPRRQIAKWH
VLCDG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1342 Download

>pF1KA1342  4388 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTCCGATC
ACCACCAGCCGGGAAGAATTTGATGAAATCCCCACAGTGGTGGGGATCTTCAGTGCATTT
GGCCTGGTCTTCACAGTCTCTCTCTTTGCATGGATCTGCTGTCAGAGAAAATCATCCAAG
TCTAACAAGACTCCTCCATACAAGTTTGTGCATGTGCTTAAGGGAGTTGATATTTACCCT
GAAAACCTAAATAGCAAAAAGAAGTTTGGAGCAGATGATAAAAATGAAGTAAAGAATAAG
CCAGCTGTGCCAAAGAATTCATTGCATCTGGATCTTGAAAAGAGAGATCTCAATGGCAAT
TTTCCCAAAACCAACCTCAAACCTGGCAGTCCTTCTGATCTGGAGAATGCAACCCCGAAG
CTCTTTTTAGAAGGGGAAAAAGAGTCAGTTTCCCCTGAGAGTTTAAAGTCCAGCACTTCC
CTTACTTCAGAAGAGAAACAAGAGAAGCTGGGAACTCTCTTCTTCTCCTTAGAATACAAC
TTCGAGAGAAAAGCATTTGTGGTCAATATCAAGGAAGCCCGTGGCTTGCCAGCCATGGAT
GAGCAGTCGATGACCTCTGACCCATATATCAAAATGACGATCCTCCCAGAGAAGAAGCAT
AAAGTGAAAACTAGAGTGCTGAGAAAAACCTTGGATCCAGCTTTTGATGAGACCTTTACA
TTCTATGGGATACCCTACACCCAAATCCAAGAATTGGCCTTGCACTTCACAATTTTGAGT
TTTGACAGGTTTTCAAGAGATGATATCATTGGGGAAGTTCTAATTCCTCTCTCGGGAATT
GAATTATCTGAAGGAAAAATGTTAATGAATAGAGAGATCATCAAGAGAAATGTTAGGAAG
TCTTCAGGACGGGGTGAGTTACTGATCTCTCTCTGCTATCAGTCCACCACAAACACTCTA
ACTGTGGTTGTCTTAAAAGCTCGACATCTGCCTAAATCTGATGTGTCCGGACTTTCAGAT
CCCTATGTCAAAGTGAACCTGTACCATGCCAAAAAGAGAATCTCCAAGAAGAAGACTCAT
GTGAAGAAATGCACCCCCAATGCAGTGTTCAATGAGCTGTTTGTCTTTGATATTCCTTGT
GAGGGCCTTGAAGATATAAGTGTTGAATTTTTGGTTTTGGATTCTGAAAGGGGGTCCCGA
AATGAGGTAATCGGGCAGTTAGTCTTGGGTGCAGCAGCAGAAGGAACTGGTGGAGAGCAC
TGGAAAGAGATCTGTGACTACCCCAGGAGACAAATTGCCAAGTGGCACGTGCTCTGTGAT
GGTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT