OR52N4 ORF clone FHC30466

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Halotag ORF Clone FHC30466

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Clone info.

Species

human

Clone Name

pFN21AE6069 Sequence (with vector) Restriction Map

Product ID

FHC30466

ORF Sequence

DNA sequence (963 bp)
Protein sequence (321 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6069

Symbol

OR52N4

Alias : OR11-64

Description

olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)

Original Clone ID

cp96069

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 963 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 321 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS44528.1 2.6e-88 99.1 OR52N4 CCDS31398.1 3.9e-66 74.0 OR52N1 CCDS31399.1 1.7e-65 73.0 OR52N2 CCDS31397.1 5.2e-62 70.5 OR52N5 CCDS31401.1 1.6e-46 52.9 OR52E4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000725 178 194 PR00245 Olfactory receptor IPR000276 201 224 PR00237 GPCR IPR000725 238 247 PR00245 Olfactory receptor IPR000276 277 303 PR00237 GPCR IPR000725 288 299 PR00245 Olfactory receptor HMMPfam IPR000276 43 295 PF00001 GPCR ProfileScan IPR017452 43 295 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 30 SFPFCSMYVVAMVGNCGLLYLIH 52 SECONDARY 23 2 67 MLSFTDLVMCSSTIPKALCIFWF 89 SECONDARY 23 3 103 MFFIHTFTGMESGVLMLMALDRY 125 SECONDARY 23 4 205 ALLIWGFDILCITISYTMILRAV 227 PRIMARY 23 5 242 TCTAHICAIVFSYTPAFFSFFSH 264 SECONDARY 23 6 269 HIIPPSCHIIVANIYLLLPPTMN 291 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 48.1 96.6 NP_110401 320 611268 45.2 97.2 NP_006628 314 608496 31.6 94.4 XP_011514321 317 608497 30.9 92.5 XP_011514322 317 608497 30.9 92.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6069 Download

>KIEE6069  963 bp
ATGCTAACACTGAATAAAACAGACCTAATACCAGCTTCATTTATTCTGAATGGAGTCCCA
GGACTGGAAGACACACAACTCTGGATTTCCTTCCCATTCTGCTCTATGTATGTTGTGGCT
ATGGTAGGGAATTGTGGACTCCTCTACCTCATTCACTATGAGGATGCCCTGCACAAACCC
ATGTACTACTTCTTGGCCATGCTTTCCTTTACTGACCTTGTTATGTGCTCTAGTACAATC
CCTAAAGCCCTCTGCATCTTCTGGTTTCATCTCAAGGACATTGGATTTGATGAATGCCTT
GTCCAGATGTTCTTCATCCACACCTTCACAGGGATGGAGTCTGGGGTGCTTATGCTTATG
GCCCTGGATCGCTATGTGGCCATCTGCTACCCCTTACGCTATTCAACTATCCTCACCAAT
CCTGTAATTGCAAAGGTTGGGACTGCCACCTTCCTGAGAGGGGTATTACTCATTATTCCC
TTTACTTTCCTCACCAAGCGCCTGCCCTACTGCAGAGGCAATATACTTCCCCATACCTAC
TGTGACCACATGTCTGTAGCCAAATTGTCCTGTGGTAATGTCAAGGTCAATGCCATCTAT
GGTCTGATGGTTGCCCTCCTGATTTGGGGCTTTGACATACTGTGTATCACCATCTCCTAT
ACCATGATTCTCCGGGCAGTGGTCAGCCTCTCCTCAGCAGATGCTCGGCAGAAGGCCTTT
AATACCTGCACTGCCCACATTTGTGCCATTGTTTTCTCCTATACTCCAGCTTTCTTCTCC
TTCTTTTCCCACCGCTTTGGGGAACACATAATCCCCCCTTCTTGCCACATCATTGTAGCC
AATATTTATCTGCTCCTACCACCCACTATGAACCCTATTGTCTATGGGGTGAAAACCAAA
CAGATACGAGACTGTGTCATAAGGATCCTTTCAGGTTCTAAGGATACCAAATCCTACAGC
ATG

ORF Protein

Cloned ORF protein sequence for pFN21AE6069 Download

>KIEE6069  321 aa
MLTLNKTDLIPASFILNGVPGLEDTQLWISFPFCSMYVVAMVGNCGLLYLIHYEDALHKP
MYYFLAMLSFTDLVMCSSTIPKALCIFWFHLKDIGFDECLVQMFFIHTFTGMESGVLMLM
ALDRYVAICYPLRYSTILTNPVIAKVGTATFLRGVLLIIPFTFLTKRLPYCRGNILPHTY
CDHMSVAKLSCGNVKVNAIYGLMVALLIWGFDILCITISYTMILRAVVSLSSADARQKAF
NTCTAHICAIVFSYTPAFFSFFSHRFGEHIIPPSCHIIVANIYLLLPPTMNPIVYGVKTK
QIRDCVIRILSGSKDTKSYSM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6069 Download

>pFN21AE6069  5668 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTAACACTGAATAAAACAGACCTAATACCAGC
TTCATTTATTCTGAATGGAGTCCCAGGACTGGAAGACACACAACTCTGGATTTCCTTCCC
ATTCTGCTCTATGTATGTTGTGGCTATGGTAGGGAATTGTGGACTCCTCTACCTCATTCA
CTATGAGGATGCCCTGCACAAACCCATGTACTACTTCTTGGCCATGCTTTCCTTTACTGA
CCTTGTTATGTGCTCTAGTACAATCCCTAAAGCCCTCTGCATCTTCTGGTTTCATCTCAA
GGACATTGGATTTGATGAATGCCTTGTCCAGATGTTCTTCATCCACACCTTCACAGGGAT
GGAGTCTGGGGTGCTTATGCTTATGGCCCTGGATCGCTATGTGGCCATCTGCTACCCCTT
ACGCTATTCAACTATCCTCACCAATCCTGTAATTGCAAAGGTTGGGACTGCCACCTTCCT
GAGAGGGGTATTACTCATTATTCCCTTTACTTTCCTCACCAAGCGCCTGCCCTACTGCAG
AGGCAATATACTTCCCCATACCTACTGTGACCACATGTCTGTAGCCAAATTGTCCTGTGG
TAATGTCAAGGTCAATGCCATCTATGGTCTGATGGTTGCCCTCCTGATTTGGGGCTTTGA
CATACTGTGTATCACCATCTCCTATACCATGATTCTCCGGGCAGTGGTCAGCCTCTCCTC
AGCAGATGCTCGGCAGAAGGCCTTTAATACCTGCACTGCCCACATTTGTGCCATTGTTTT
CTCCTATACTCCAGCTTTCTTCTCCTTCTTTTCCCACCGCTTTGGGGAACACATAATCCC
CCCTTCTTGCCACATCATTGTAGCCAATATTTATCTGCTCCTACCACCCACTATGAACCC
TATTGTCTATGGGGTGAAAACCAAACAGATACGAGACTGTGTCATAAGGATCCTTTCAGG
TTCTAAGGATACCAAATCCTACAGCATGGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT