OR5AR1 ORF clone FHC28007

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Halotag ORF Clone FHC28007

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Clone info.

Species

human

Clone Name

pFN21AE5466 Sequence (with vector) Restriction Map

Product ID

FHC28007

ORF Sequence

DNA sequence (930 bp)
Protein sequence (310 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5466

Symbol

OR5AR1

Alias : OR11-209

Description

olfactory receptor, family 5, subfamily AR, member 1 (gene/pseudogene)

Original Clone ID

cp95466

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

Features of the cloned ORF sequence

Description

Length: 930 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 310 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31551.1 3.8e-55 58.6 OR5B12 CCDS31552.1 8.5e-54 59.5 OR5B21 CCDS31513.1 1.6e-51 56.7 OR5W2 CCDS31516.1 2.6e-51 55.7 OR5AS1 CCDS31534.1 7.1e-50 54.1 OR5AP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 19 QDPQMEIIFFVVFLIVYLVNVVG 41 SECONDARY 23 2 60 YFFLCNLSFVDLGYSSAIAPRML 82 SECONDARY 23 3 99 TQFAFFVGFVDAECYVLAAMAYG 121 SECONDARY 23 4 140 VCLALMLGSYLAGLVSLVAHTTL 162 PRIMARY 23 5 206 IEFSTILIIFISYTFILVAIIR 227 PRIMARY 22 6 243 SHLTGITLFYGTVMFMYLRPTS 264 SECONDARY 22 7 273 WASVFYTVIIPMLNPLIYSLR 293 SECONDARY 21
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003688 314 608492 52.6 99.4 NP_006628 314 608496 53.0 98.1 XP_011520809 312 603232 45.6 99.0 NP_036492 312 603232 45.6 99.0 XP_011520808 322 603232 45.6 99.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5466 Download

>KIEE5466  930 bp
ATGGATAAAGAAAACAGCTCAATGGTGACTGAGTTTATCTTCATGGGCATCACCCAGGAC
CCTCAGATGGAGATCATCTTCTTCGTGGTCTTCCTCATAGTTTACCTGGTTAATGTAGTG
GGGAATATTGGTATGATTATCCTGATTACAACAGACACTCAGCTTCACACACCCATGTAT
TTTTTCCTCTGCAACCTCTCCTTTGTTGACCTGGGCTACTCCTCAGCCATTGCCCCCAGG
ATGCTGGCTGACTTCCTAACAAATCACAAAGTTATCTCCTTCTCCAGCTGTGCCACCCAG
TTTGCTTTTTTTGTAGGTTTTGTGGATGCTGAGTGCTATGTCCTGGCAGCCATGGCCTAT
GGTCGTTTTGTGGCCATTTGTCGACCCCTCCACTATAGCACCTTCATGTCCAAGCAGGTC
TGCTTGGCTCTCATGCTGGGCTCTTACCTGGCTGGTCTAGTGAGTTTAGTAGCCCACACT
ACCCTCACCTTCAGCCTGAGTTACTGTGGTTCCAATATCATCAATCATTTCTTCTGCGAA
ATCCCACCACTCTTGGCCCTCTCTTGCTCAGACACCTACATCAGTGAGATCTTGCTCTTC
AGTCTGTGTGGCTTCATTGAATTCAGCACCATCCTCATCATCTTCATCTCCTATACCTTT
ATCCTTGTTGCAATCATCAGAATGCGTTCAGCTGAAGGCCGCCTTAAGGCTTTCTCCACC
TGCGGGTCTCACCTTACTGGCATCACCCTCTTCTATGGCACAGTCATGTTTATGTACCTG
AGGCCAACATCCAGCTACTCCCTGGACCAAGACAAGTGGGCCTCTGTGTTCTACACGGTT
ATCATCCCCATGTTAAATCCCTTGATCTACAGTTTGCGGAACAAGGATGTGAAAGCTGCT
TTCAAAAAGCTAATTGGAAAAAAATCTCAA

ORF Protein

Cloned ORF protein sequence for pFN21AE5466 Download

>KIEE5466  310 aa
MDKENSSMVTEFIFMGITQDPQMEIIFFVVFLIVYLVNVVGNIGMIILITTDTQLHTPMY
FFLCNLSFVDLGYSSAIAPRMLADFLTNHKVISFSSCATQFAFFVGFVDAECYVLAAMAY
GRFVAICRPLHYSTFMSKQVCLALMLGSYLAGLVSLVAHTTLTFSLSYCGSNIINHFFCE
IPPLLALSCSDTYISEILLFSLCGFIEFSTILIIFISYTFILVAIIRMRSAEGRLKAFST
CGSHLTGITLFYGTVMFMYLRPTSSYSLDQDKWASVFYTVIIPMLNPLIYSLRNKDVKAA
FKKLIGKKSQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5466 Download

>pFN21AE5466  5635 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGATAAAGAAAACAGCTCAATGGTGACTGAGTT
TATCTTCATGGGCATCACCCAGGACCCTCAGATGGAGATCATCTTCTTCGTGGTCTTCCT
CATAGTTTACCTGGTTAATGTAGTGGGGAATATTGGTATGATTATCCTGATTACAACAGA
CACTCAGCTTCACACACCCATGTATTTTTTCCTCTGCAACCTCTCCTTTGTTGACCTGGG
CTACTCCTCAGCCATTGCCCCCAGGATGCTGGCTGACTTCCTAACAAATCACAAAGTTAT
CTCCTTCTCCAGCTGTGCCACCCAGTTTGCTTTTTTTGTAGGTTTTGTGGATGCTGAGTG
CTATGTCCTGGCAGCCATGGCCTATGGTCGTTTTGTGGCCATTTGTCGACCCCTCCACTA
TAGCACCTTCATGTCCAAGCAGGTCTGCTTGGCTCTCATGCTGGGCTCTTACCTGGCTGG
TCTAGTGAGTTTAGTAGCCCACACTACCCTCACCTTCAGCCTGAGTTACTGTGGTTCCAA
TATCATCAATCATTTCTTCTGCGAAATCCCACCACTCTTGGCCCTCTCTTGCTCAGACAC
CTACATCAGTGAGATCTTGCTCTTCAGTCTGTGTGGCTTCATTGAATTCAGCACCATCCT
CATCATCTTCATCTCCTATACCTTTATCCTTGTTGCAATCATCAGAATGCGTTCAGCTGA
AGGCCGCCTTAAGGCTTTCTCCACCTGCGGGTCTCACCTTACTGGCATCACCCTCTTCTA
TGGCACAGTCATGTTTATGTACCTGAGGCCAACATCCAGCTACTCCCTGGACCAAGACAA
GTGGGCCTCTGTGTTCTACACGGTTATCATCCCCATGTTAAATCCCTTGATCTACAGTTT
GCGGAACAAGGATGTGAAAGCTGCTTTCAAAAAGCTAATTGGAAAAAAATCTCAAGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT