OR5T3 ORF clone FHC27997

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Halotag ORF Clone FHC27997

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Clone info.

Species

human

Clone Name

pFN21AE5487 Sequence (with vector) Restriction Map

Product ID

FHC27997

ORF Sequence

DNA sequence (1020 bp)
Protein sequence (340 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5487

Symbol

OR5T3

Alias : OR11-178, OR5T3Q

Description

olfactory receptor, family 5, subfamily T, member 3

Original Clone ID

cp95487

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1020 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 340 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31524.1 8.8e-112 100.0 OR5T3 CCDS31525.1 4.1e-85 82.3 OR5T1 CCDS31523.1 5e-78 77.6 OR5T2 CCDS31534.1 9.1e-56 57.3 OR5AP2 CCDS31513.1 4.6e-54 55.8 OR5W2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 56 80 PR00237 GPCR IPR000725 122 133 PR00245 Olfactory receptor IPR000276 134 156 PR00237 GPCR IPR000725 159 171 PR00245 Olfactory receptor IPR000725 206 222 PR00245 Olfactory receptor IPR000725 266 275 PR00245 Olfactory receptor IPR000276 302 328 PR00237 GPCR IPR000725 313 324 PR00245 Olfactory receptor HMMPfam IPR000276 71 320 PF00001 GPCR ProfileScan IPR017452 71 320 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 48 TDDFELQVFLFLLFFAIYLFTLI 70 PRIMARY 23 2 91 YFLSVLSFLDACYSTVVTPKMLV 113 SECONDARY 23 3 130 QMLLFVTFGTTECFLLAAMAYDH 152 SECONDARY 23 4 176 TASYVAGILHATIHIVATFSLSF 198 SECONDARY 23 5 237 EIVTILIVLISCDFILLSILKMH 259 PRIMARY 23 6 299 DHDIIVSIFYTIVIPKLNPIIYS 321 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 55.1 89.1 NP_003688 314 608492 49.7 88.8 NP_001004729 311 615702 48.3 88.8 NP_835462 317 608493 46.3 89.4 NP_003691 308 608494 44.3 88.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5487 Download

>KIEE5487  1020 bp
ATGGACTCCACTTTCACAGGCTATAACCTTTATAACCTGCAAGTAAAAACTGAAATGGAC
AAGTTGTCATCAGGTTTGGATATATACAGGAATCCACTGAAGAACAAGACTGAAGTCACC
ATGTTTATATTGACAGGCTTCACAGATGATTTTGAGCTGCAAGTCTTCCTATTTTTACTA
TTTTTTGCAATCTATCTCTTTACCTTGATAGGCAATTTAGGGCTGGTTGTGTTGGTCATT
GAGGATTCCTGGCTCCACAACCCCATGTATTATTTTCTTAGTGTTTTATCATTCTTGGAT
GCTTGCTATTCTACAGTTGTCACTCCAAAAATGTTGGTCAATTTCCTGGCAAAAAATAAA
TCCATTTCATTTATCGGATGTGCAACACAGATGCTTCTTTTTGTTACTTTTGGAACTACA
GAATGTTTTCTCTTGGCTGCAATGGCTTATGATCACTATGTAGCCATCTACAACCCTCTC
CTGTATTCAGTGAGCATGTCACCCAGAGTCTATGTGCCACTCATCACTGCTTCCTACGTT
GCTGGCATTTTACATGCTACTATACATATAGTGGCTACATTTAGCCTGTCCTTCTGTGGA
TCCAATGAAATTAGGCATGTCTTTTGTGATATGCCTCCTCTCCTTGCTATTTCTTGTTCT
GACACTCACACAAACCAGCTTCTACTCTTCTACTTTGTGGGTTCTATTGAGATAGTCACT
ATCCTGATTGTCCTCATTTCCTGTGATTTCATTCTGTTGTCCATTCTGAAGATGCATTCT
GCTAAGGGAAGGCAAAAGGCCTTCTCTACATGTGGCTCTCACCTAACTGGAGTGACAATT
TATCATGGAACAATTCTCGTCAGTTATATGAGACCAAGTTCCAGCTATGCTTCAGACCAT
GACATCATAGTGTCAATATTTTACACAATTGTGATTCCCAAGTTGAATCCCATCATCTAT
AGTTTGAGGAACAAAGAAGTAAAAAAGGCAGTGAAGAAAATGTTGAAATTGGTTTACAAA

ORF Protein

Cloned ORF protein sequence for pFN21AE5487 Download

>KIEE5487  340 aa
MDSTFTGYNLYNLQVKTEMDKLSSGLDIYRNPLKNKTEVTMFILTGFTDDFELQVFLFLL
FFAIYLFTLIGNLGLVVLVIEDSWLHNPMYYFLSVLSFLDACYSTVVTPKMLVNFLAKNK
SISFIGCATQMLLFVTFGTTECFLLAAMAYDHYVAIYNPLLYSVSMSPRVYVPLITASYV
AGILHATIHIVATFSLSFCGSNEIRHVFCDMPPLLAISCSDTHTNQLLLFYFVGSIEIVT
ILIVLISCDFILLSILKMHSAKGRQKAFSTCGSHLTGVTIYHGTILVSYMRPSSSYASDH
DIIVSIFYTIVIPKLNPIIYSLRNKEVKKAVKKMLKLVYK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5487 Download

>pFN21AE5487  5725 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGACTCCACTTTCACAGGCTATAACCTTTATAA
CCTGCAAGTAAAAACTGAAATGGACAAGTTGTCATCAGGTTTGGATATATACAGGAATCC
ACTGAAGAACAAGACTGAAGTCACCATGTTTATATTGACAGGCTTCACAGATGATTTTGA
GCTGCAAGTCTTCCTATTTTTACTATTTTTTGCAATCTATCTCTTTACCTTGATAGGCAA
TTTAGGGCTGGTTGTGTTGGTCATTGAGGATTCCTGGCTCCACAACCCCATGTATTATTT
TCTTAGTGTTTTATCATTCTTGGATGCTTGCTATTCTACAGTTGTCACTCCAAAAATGTT
GGTCAATTTCCTGGCAAAAAATAAATCCATTTCATTTATCGGATGTGCAACACAGATGCT
TCTTTTTGTTACTTTTGGAACTACAGAATGTTTTCTCTTGGCTGCAATGGCTTATGATCA
CTATGTAGCCATCTACAACCCTCTCCTGTATTCAGTGAGCATGTCACCCAGAGTCTATGT
GCCACTCATCACTGCTTCCTACGTTGCTGGCATTTTACATGCTACTATACATATAGTGGC
TACATTTAGCCTGTCCTTCTGTGGATCCAATGAAATTAGGCATGTCTTTTGTGATATGCC
TCCTCTCCTTGCTATTTCTTGTTCTGACACTCACACAAACCAGCTTCTACTCTTCTACTT
TGTGGGTTCTATTGAGATAGTCACTATCCTGATTGTCCTCATTTCCTGTGATTTCATTCT
GTTGTCCATTCTGAAGATGCATTCTGCTAAGGGAAGGCAAAAGGCCTTCTCTACATGTGG
CTCTCACCTAACTGGAGTGACAATTTATCATGGAACAATTCTCGTCAGTTATATGAGACC
AAGTTCCAGCTATGCTTCAGACCATGACATCATAGTGTCAATATTTTACACAATTGTGAT
TCCCAAGTTGAATCCCATCATCTATAGTTTGAGGAACAAAGAAGTAAAAAAGGCAGTGAA
GAAAATGTTGAAATTGGTTTACAAAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT