OR4C3 ORF clone FHC27972

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27972

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Clone info.

Species

human

Clone Name

pFN21AE5476 Sequence (with vector) Restriction Map

Product ID

FHC27972

ORF Sequence

DNA sequence (987 bp)
Protein sequence (329 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5476

Symbol

OR4C3

Alias : OR11-98

Description

olfactory receptor, family 4, subfamily C, member 3

Original Clone ID

cp95476

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 987 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 329 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31489.1 7e-92 100.0 OR4C3 CCDS31501.1 1.5e-55 63.1 OR4C15 CCDS31496.1 9.4e-54 61.7 OR4C12 CCDS31495.1 1.2e-53 62.9 OR4C13 CCDS73288.1 2.1e-52 61.2 OR4C46 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 51 75 PR00237 GPCR IPR000276 84 105 PR00237 GPCR IPR000725 117 128 PR00245 Olfactory receptor IPR000276 129 151 PR00237 GPCR IPR000725 154 166 PR00245 Olfactory receptor IPR000725 201 217 PR00245 Olfactory receptor IPR000725 260 269 PR00245 Olfactory receptor IPR000276 294 320 PR00237 GPCR IPR000725 305 316 PR00245 Olfactory receptor HMMPfam IPR000276 66 312 PF00001 GPCR ProfileScan IPR017452 66 312 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 LLLMFLLVFIGNTAPAFSVTLES 27 SECONDARY 23 2 51 VLFVVFLLIYVVTVCGNMLIVVT 73 PRIMARY 23 3 123 MAQLFGAHFLGGVEIILLTVMAY 145 PRIMARY 23 4 167 AMLVGVAWLGGFLHSLVQLLLVL 189 PRIMARY 23 5 216 NTYVIGLLVVANSGLICLLNFLM 238 PRIMARY 23 6 261 ALSTCGAHFIVVALFFVPCIFTY 283 PRIMARY 23 7 295 NMALFYGILTPMLNPLIYTLRNE 317 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004703 309 614273 61.2 90.9 XP_011514322 317 608497 44.1 90.0 XP_011514321 317 608497 44.1 90.0 NP_036501 317 608497 44.1 90.0 XP_011520809 312 603232 41.8 89.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5476 Download

>KIEE5476  987 bp
ATGCAATTAGTTCTATTACTTATGTTTCTCCTTGTCTTTATAGGCAATACTGCACCTGCA
TTCTCAGTGACCTTGGAATCTATGGACATACCACAAAATATCACAGAATTTTTCATGCTG
GGGCTCTCACAGAACTCAGAGGTACAGAGAGTTCTCTTTGTGGTCTTTTTGCTGATCTAT
GTGGTCACGGTTTGTGGCAACATGCTCATTGTGGTCACTATCACCTCCAGCCCCACGCTG
GCTTCCCCTGTGTATTTTTTCCTGGCCAACCTATCCTTTATTGACACCTTTTATTCTTCT
TCTATGGCTCCTAAACTCATTGCTGACTCATTGTATGAGGGGAGAACCATCTCTTATGAG
TGCTGCATGGCTCAGCTCTTTGGAGCTCATTTTTTGGGAGGTGTTGAGATCATTCTGCTC
ACAGTGATGGCTTATGACCGCTATGTGGCCATCTGTAAGCCCCTGCACAATACTACCATC
ATGACCAGGCATCTCTGTGCCATGCTTGTAGGGGTGGCTTGGCTTGGGGGCTTCCTGCAT
TCATTGGTTCAGCTCCTCCTGGTCCTTTGGTTGCCCTTCTGTGGGCCCAATGTGATCAAT
CACTTTGCCTGTGACTTGTACCCTTTGCTGGAAGTTGCCTGCACCAACACGTATGTCATT
GGTCTGCTGGTGGTTGCCAACAGTGGTTTAATCTGCCTGTTGAACTTCCTCATGCTGGCT
GCCTCCTACATTGTCATCCTGTACTCCTTGAGGTCCCACAGTGCAGATGGGAGATGCAAA
GCCCTCTCCACCTGTGGAGCCCACTTCATTGTTGTTGCCTTGTTCTTTGTGCCCTGTATA
TTTACTTATGTGCATCCATTTTCTACTTTACCTATAGACAAAAATATGGCATTATTTTAT
GGTATTCTGACACCTATGTTGAATCCACTCATTTATACCCTGAGAAATGAAGAGGTAAAA
AATGCCATGAGAAAGCTCTTTACATGG

ORF Protein

Cloned ORF protein sequence for pFN21AE5476 Download

>KIEE5476  329 aa
MQLVLLLMFLLVFIGNTAPAFSVTLESMDIPQNITEFFMLGLSQNSEVQRVLFVVFLLIY
VVTVCGNMLIVVTITSSPTLASPVYFFLANLSFIDTFYSSSMAPKLIADSLYEGRTISYE
CCMAQLFGAHFLGGVEIILLTVMAYDRYVAICKPLHNTTIMTRHLCAMLVGVAWLGGFLH
SLVQLLLVLWLPFCGPNVINHFACDLYPLLEVACTNTYVIGLLVVANSGLICLLNFLMLA
ASYIVILYSLRSHSADGRCKALSTCGAHFIVVALFFVPCIFTYVHPFSTLPIDKNMALFY
GILTPMLNPLIYTLRNEEVKNAMRKLFTW

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5476 Download

>pFN21AE5476  5692 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAATTAGTTCTATTACTTATGTTTCTCCTTGT
CTTTATAGGCAATACTGCACCTGCATTCTCAGTGACCTTGGAATCTATGGACATACCACA
AAATATCACAGAATTTTTCATGCTGGGGCTCTCACAGAACTCAGAGGTACAGAGAGTTCT
CTTTGTGGTCTTTTTGCTGATCTATGTGGTCACGGTTTGTGGCAACATGCTCATTGTGGT
CACTATCACCTCCAGCCCCACGCTGGCTTCCCCTGTGTATTTTTTCCTGGCCAACCTATC
CTTTATTGACACCTTTTATTCTTCTTCTATGGCTCCTAAACTCATTGCTGACTCATTGTA
TGAGGGGAGAACCATCTCTTATGAGTGCTGCATGGCTCAGCTCTTTGGAGCTCATTTTTT
GGGAGGTGTTGAGATCATTCTGCTCACAGTGATGGCTTATGACCGCTATGTGGCCATCTG
TAAGCCCCTGCACAATACTACCATCATGACCAGGCATCTCTGTGCCATGCTTGTAGGGGT
GGCTTGGCTTGGGGGCTTCCTGCATTCATTGGTTCAGCTCCTCCTGGTCCTTTGGTTGCC
CTTCTGTGGGCCCAATGTGATCAATCACTTTGCCTGTGACTTGTACCCTTTGCTGGAAGT
TGCCTGCACCAACACGTATGTCATTGGTCTGCTGGTGGTTGCCAACAGTGGTTTAATCTG
CCTGTTGAACTTCCTCATGCTGGCTGCCTCCTACATTGTCATCCTGTACTCCTTGAGGTC
CCACAGTGCAGATGGGAGATGCAAAGCCCTCTCCACCTGTGGAGCCCACTTCATTGTTGT
TGCCTTGTTCTTTGTGCCCTGTATATTTACTTATGTGCATCCATTTTCTACTTTACCTAT
AGACAAAAATATGGCATTATTTTATGGTATTCTGACACCTATGTTGAATCCACTCATTTA
TACCCTGAGAAATGAAGAGGTAAAAAATGCCATGAGAAAGCTCTTTACATGGGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT