OR52E8 ORF clone FHC27942

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27942

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Clone info.

Species

human

Clone Name

pFN21AE6045 Sequence (with vector) Restriction Map

Product ID

FHC27942

ORF Sequence

DNA sequence (951 bp)
Protein sequence (317 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6045

Symbol

OR52E8

Alias : OR11-54

Description

olfactory receptor, family 52, subfamily E, member 8

Original Clone ID

cp96045

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 951 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 317 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31400.1 2e-87 100.0 OR52E8 CCDS53597.1 1.8e-76 89.1 OR52E6 CCDS31401.1 2.6e-61 69.0 OR52E4 CCDS31371.1 2.2e-57 66.6 OR52E2 CCDS31370.1 7.8e-54 59.4 OR52J3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 32 56 PR00237 GPCR IPR000725 98 109 PR00245 Olfactory receptor IPR000276 110 132 PR00237 GPCR IPR000725 135 147 PR00245 Olfactory receptor IPR000725 182 198 PR00245 Olfactory receptor IPR000276 204 227 PR00237 GPCR IPR000725 241 250 PR00245 Olfactory receptor IPR000276 279 305 PR00237 GPCR IPR000725 290 301 PR00245 Olfactory receptor HMMPfam IPR000276 47 297 PF00001 GPCR ProfileScan IPR017452 47 297 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 GVPFFFVYLVALLGNTALLFVIQ 56 PRIMARY 23 2 104 LSHMFFIHFFTAMESIVLVAMAF 126 PRIMARY 23 3 149 LIAGIAVLRSLYMVVPLVFLLLR 171 PRIMARY 23 4 210 SLLLLDVILIILSYVRILYAVFC 232 PRIMARY 23 5 247 GSHIGVILAFFTPAFFSFLTHRF 269 SECONDARY 23 6 276 YIHIILANLYVVVPPALNPVIYG 298 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 46.9 97.2 NP_689643 318 611267 45.2 98.7 NP_002539 312 164342 34.0 95.6 XP_011520809 312 603232 33.7 95.0 NP_036492 312 603232 33.7 95.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6045 Download

>KIEE6045  951 bp
ATGGCAGGAAGAATGTCTACGTCTAATCACACCCAGTTCCATCCTTCTTCATTCCTACTG
CTGGGTATCCCAGGGCTAGAAGATGTGCACATTTGGATTGGAGTCCCTTTTTTCTTTGTG
TATCTTGTTGCACTCCTGGGAAACACTGCTCTCTTGTTTGTGATCCAGACTGAGCAGAGT
CTCCATGAGCCTATGTACTACTTCCTGGCCATGTTGGATTCCATTGACCTGGGCTTGTCT
ACAGCCACCATCCCCAAAATGTTGGGCATCTTCTGGTTCAATACCAAAGAAATATCTTTT
GGAGGCTGCCTTTCTCACATGTTCTTCATCCATTTCTTCACTGCTATGGAGAGCATTGTG
TTGGTGGCCATGGCCTTTGACCGCTACATTGCCATTTGCAAACCTCTTCGGTACACCATG
ATCCTCACCAGCAAAATCATCAGCCTCATTGCAGGCATTGCTGTCCTGAGGAGCCTGTAC
ATGGTTGTTCCACTGGTGTTTCTCCTTCTGAGGCTGCCCTTCTGTGGGCATCGTATCATC
CCTCATACTTATTGTGAGCACATGGGCATTGCCCGTCTGGCCTGTGCCAGCATCAAAGTC
AACATTAGGTTTGGCCTTGGCAACATATCTCTCTTGTTACTGGATGTTATCCTTATTATT
CTCTCCTATGTCAGGATCCTGTATGCTGTCTTCTGCCTGCCCTCCTGGGAAGCTCGACTC
AAAGCTCTCAACACCTGTGGTTCTCATATTGGTGTTATCTTAGCCTTTTTTACACCAGCA
TTTTTTTCATTCTTGACACATCGTTTTGGCCATAATATCCCACAGTATATACATATTATA
TTAGCCAACCTGTATGTGGTTGTCCCACCAGCCCTCAATCCTGTAATCTATGGAGTCAGG
ACAAAGCAGATTCGAGAGAGAGTGCTGAGGATTTTTCTCAAGACCAATCAC

ORF Protein

Cloned ORF protein sequence for pFN21AE6045 Download

>KIEE6045  317 aa
MAGRMSTSNHTQFHPSSFLLLGIPGLEDVHIWIGVPFFFVYLVALLGNTALLFVIQTEQS
LHEPMYYFLAMLDSIDLGLSTATIPKMLGIFWFNTKEISFGGCLSHMFFIHFFTAMESIV
LVAMAFDRYIAICKPLRYTMILTSKIISLIAGIAVLRSLYMVVPLVFLLLRLPFCGHRII
PHTYCEHMGIARLACASIKVNIRFGLGNISLLLLDVILIILSYVRILYAVFCLPSWEARL
KALNTCGSHIGVILAFFTPAFFSFLTHRFGHNIPQYIHIILANLYVVVPPALNPVIYGVR
TKQIRERVLRIFLKTNH

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6045 Download

>pFN21AE6045  5656 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCAGGAAGAATGTCTACGTCTAATCACACCCA
GTTCCATCCTTCTTCATTCCTACTGCTGGGTATCCCAGGGCTAGAAGATGTGCACATTTG
GATTGGAGTCCCTTTTTTCTTTGTGTATCTTGTTGCACTCCTGGGAAACACTGCTCTCTT
GTTTGTGATCCAGACTGAGCAGAGTCTCCATGAGCCTATGTACTACTTCCTGGCCATGTT
GGATTCCATTGACCTGGGCTTGTCTACAGCCACCATCCCCAAAATGTTGGGCATCTTCTG
GTTCAATACCAAAGAAATATCTTTTGGAGGCTGCCTTTCTCACATGTTCTTCATCCATTT
CTTCACTGCTATGGAGAGCATTGTGTTGGTGGCCATGGCCTTTGACCGCTACATTGCCAT
TTGCAAACCTCTTCGGTACACCATGATCCTCACCAGCAAAATCATCAGCCTCATTGCAGG
CATTGCTGTCCTGAGGAGCCTGTACATGGTTGTTCCACTGGTGTTTCTCCTTCTGAGGCT
GCCCTTCTGTGGGCATCGTATCATCCCTCATACTTATTGTGAGCACATGGGCATTGCCCG
TCTGGCCTGTGCCAGCATCAAAGTCAACATTAGGTTTGGCCTTGGCAACATATCTCTCTT
GTTACTGGATGTTATCCTTATTATTCTCTCCTATGTCAGGATCCTGTATGCTGTCTTCTG
CCTGCCCTCCTGGGAAGCTCGACTCAAAGCTCTCAACACCTGTGGTTCTCATATTGGTGT
TATCTTAGCCTTTTTTACACCAGCATTTTTTTCATTCTTGACACATCGTTTTGGCCATAA
TATCCCACAGTATATACATATTATATTAGCCAACCTGTATGTGGTTGTCCCACCAGCCCT
CAATCCTGTAATCTATGGAGTCAGGACAAAGCAGATTCGAGAGAGAGTGCTGAGGATTTT
TCTCAAGACCAATCACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT