OR1D5 ORF clone FHC11339

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Halotag ORF Clone FHC11339

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Clone info.

Species

human

Clone Name

pFN21AE0885 Sequence (with vector) Restriction Map

Product ID

FHC11339

Flexi Clone PID

FXC11339

ORF Sequence

DNA sequence (990 bp)
Protein sequence (330 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529301]

Gene

KIEE0885

Symbol

OR1D5

Alias : C17orf2, OR17-2, OR17-30, OR17-31, OR1D4

Description

olfactory receptor, family 1, subfamily D, member 5

Original Clone ID

cp01285

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 990 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 330 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS58499.1 2.2e-95 99.4 OR1D5 CCDS11019.1 2.2e-78 82.6 OR1D2 CCDS35123.1 5.8e-49 55.3 OR1N2 CCDS12317.1 1.2e-46 55.5 OR7C1 CCDS10496.1 1.7e-46 51.5 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 44 68 PR00237 GPCR IPR000276 77 98 PR00237 GPCR IPR000725 110 121 PR00245 Olfactory receptor IPR000276 122 144 PR00237 GPCR IPR000725 147 159 PR00245 Olfactory receptor IPR000725 194 210 PR00245 Olfactory receptor IPR000276 217 240 PR00237 GPCR IPR000725 254 263 PR00245 Olfactory receptor IPR000276 289 315 PR00237 GPCR IPR000725 300 311 PR00245 Olfactory receptor HMMPfam IPR000276 59 307 PF00001 GPCR ProfileScan IPR017452 59 307 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 46 FWMFLSMYLVTVLGNVLIILAIS 68 PRIMARY 23 2 112 YAGCLTQLYFLVSLVTLDNLILA 134 PRIMARY 23 3 159 CVLLLSLCWGLSVLYGLLLTFLL 181 PRIMARY 23 4 211 HIIHTALIATGCFIFLTPLGFMT 233 PRIMARY 23 5 259 CASHLGVVSLFYGTLAMVYLQPL 281 SECONDARY 23 6 289 SVATVMYAVLTPMMNPFIYSLR 310 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002539 312 164342 82.6 93.9 NP_036492 312 603232 51.5 92.7 XP_011520809 312 603232 51.5 92.7 XP_011520808 322 603232 51.5 92.7 NP_001005191 312 611538 53.7 92.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0885 Download

>KIEE0885  990 bp
ATGAGGGCACTTAATAAACATTTGTTGGTGTTAATGTTACAGAAAGTTGGGGGAATGGAT
GGAGATAACCAGAGTGAGAACTCACAGTTCCTTCTCCTGGGGATCTCAGAGAGTCCTGAG
CAGCAGCAGATCCTGTTTTGGATGTTCCTGTCCATGTACCTGGTCACGGTGCTGGGAAAT
GTGCTCATCATCCTGGCCATCAGCTCTGATTCCCACCTGCACACCCCCATGTACTTCTTC
CTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAGATGCTG
GTGAACTTCCAGTCCCAGAACAAAGCCATCTCCTATGCAGGGTGTCTGACACAGCTCTAC
TTCCTGGTCTCCTTGGTGACCCTGGACAACCTCATCCTGGCCGTGATGGCGTATGATCGC
TATGTGGCCACCTGCTGCCCCCTCCACTATGTCACAGCCATGAGCCCTGGGCTCTGTGTC
TTGCTCCTCTCCTTGTGTTGGGGGCTGTCTGTTCTCTATGGCCTCCTCCTCACCTTCCTC
CTGACCAGGGTGACCTTCTGTGGGCCTCGAGAGATCCACTACCTCTTCTGTGACATGTAC
ATCCTGCTGTGGCTGGCATGTTCCAACACCCACATCATTCACACAGCGTTGATTGCCACT
GGCTGCTTCATCTTCCTCACCCCCTTAGGGTTCATGACCACATCCTATGTACGTATTGTC
AGAACCATCCTTCAAATGCCCTCGGCCTCTAAGAAATACAAAACCTTCTCTACCTGTGCC
TCCCATTTGGGTGTGGTCTCCCTCTTTTATGGGACGCTTGCTATGGTGTACCTGCAGCCC
CTCCATACCTACTCCATGAAGGACTCAGTAGCCACAGTGATGTATGCTGTGCTGACACCT
ATGATGAACCCTTTCATCTACAGCCTGAGGAACAAAGACATGCATGGGGCTCCGGGAAGA
GTCCTATGGAGACCCTTTCAGAGGCCTAAA

ORF Protein

Cloned ORF protein sequence for pFN21AE0885 Download

>KIEE0885  330 aa
MRALNKHLLVLMLQKVGGMDGDNQSENSQFLLLGISESPEQQQILFWMFLSMYLVTVLGN
VLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLY
FLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFL
LTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIV
RTILQMPSASKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVLTP
MMNPFIYSLRNKDMHGAPGRVLWRPFQRPK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0885 Download

>pFN21AE0885  5695 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGGGCACTTAATAAACATTTGTTGGTGTTAAT
GTTACAGAAAGTTGGGGGAATGGATGGAGATAACCAGAGTGAGAACTCACAGTTCCTTCT
CCTGGGGATCTCAGAGAGTCCTGAGCAGCAGCAGATCCTGTTTTGGATGTTCCTGTCCAT
GTACCTGGTCACGGTGCTGGGAAATGTGCTCATCATCCTGGCCATCAGCTCTGATTCCCA
CCTGCACACCCCCATGTACTTCTTCCTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGT
CACCAACACAATCCCCAAGATGCTGGTGAACTTCCAGTCCCAGAACAAAGCCATCTCCTA
TGCAGGGTGTCTGACACAGCTCTACTTCCTGGTCTCCTTGGTGACCCTGGACAACCTCAT
CCTGGCCGTGATGGCGTATGATCGCTATGTGGCCACCTGCTGCCCCCTCCACTATGTCAC
AGCCATGAGCCCTGGGCTCTGTGTCTTGCTCCTCTCCTTGTGTTGGGGGCTGTCTGTTCT
CTATGGCCTCCTCCTCACCTTCCTCCTGACCAGGGTGACCTTCTGTGGGCCTCGAGAGAT
CCACTACCTCTTCTGTGACATGTACATCCTGCTGTGGCTGGCATGTTCCAACACCCACAT
CATTCACACAGCGTTGATTGCCACTGGCTGCTTCATCTTCCTCACCCCCTTAGGGTTCAT
GACCACATCCTATGTACGTATTGTCAGAACCATCCTTCAAATGCCCTCGGCCTCTAAGAA
ATACAAAACCTTCTCTACCTGTGCCTCCCATTTGGGTGTGGTCTCCCTCTTTTATGGGAC
GCTTGCTATGGTGTACCTGCAGCCCCTCCATACCTACTCCATGAAGGACTCAGTAGCCAC
AGTGATGTATGCTGTGCTGACACCTATGATGAACCCTTTCATCTACAGCCTGAGGAACAA
AGACATGCATGGGGCTCCGGGAAGAGTCCTATGGAGACCCTTTCAGAGGCCTAAAGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT