OR1D5 ORF clone FXC11339

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Flexi ORF Clone FXC11339

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Clone info.

Species

human

Clone Name

pF1KE0885 Sequence (with vector) Restriction Map

Product ID

FXC11339

HaloTag Clone PID

FHC11339

ORF Sequence

DNA sequence (990 bp)
Protein sequence (330 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529301]

Gene

KIEE0885

Symbol

OR1D5

Alias : C17orf2, OR17-2, OR17-30, OR17-31, OR1D4

Description

olfactory receptor, family 1, subfamily D, member 5

Original Clone ID

cp01285

Features of the cloned ORF sequence

Description

Length: 990 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 330 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS58499.1 2.2e-95 99.4 OR1D5 CCDS11019.1 2.2e-78 82.6 OR1D2 CCDS35123.1 5.8e-49 55.3 OR1N2 CCDS12317.1 1.2e-46 55.5 OR7C1 CCDS10496.1 1.7e-46 51.5 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 44 68 PR00237 GPCR IPR000276 77 98 PR00237 GPCR IPR000725 110 121 PR00245 Olfactory receptor IPR000276 122 144 PR00237 GPCR IPR000725 147 159 PR00245 Olfactory receptor IPR000725 194 210 PR00245 Olfactory receptor IPR000276 217 240 PR00237 GPCR IPR000725 254 263 PR00245 Olfactory receptor IPR000276 289 315 PR00237 GPCR IPR000725 300 311 PR00245 Olfactory receptor HMMPfam IPR000276 59 307 PF00001 GPCR ProfileScan IPR017452 59 307 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 46 FWMFLSMYLVTVLGNVLIILAIS 68 PRIMARY 23 2 112 YAGCLTQLYFLVSLVTLDNLILA 134 PRIMARY 23 3 159 CVLLLSLCWGLSVLYGLLLTFLL 181 PRIMARY 23 4 211 HIIHTALIATGCFIFLTPLGFMT 233 PRIMARY 23 5 259 CASHLGVVSLFYGTLAMVYLQPL 281 SECONDARY 23 6 289 SVATVMYAVLTPMMNPFIYSLR 310 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002539 312 164342 82.6 93.9 NP_036492 312 603232 51.5 92.7 XP_011520809 312 603232 51.5 92.7 XP_011520808 322 603232 51.5 92.7 NP_001005191 312 611538 53.7 92.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0885 Download

>KIEE0885  990 bp
ATGAGGGCACTTAATAAACATTTGTTGGTGTTAATGTTACAGAAAGTTGGGGGAATGGAT
GGAGATAACCAGAGTGAGAACTCACAGTTCCTTCTCCTGGGGATCTCAGAGAGTCCTGAG
CAGCAGCAGATCCTGTTTTGGATGTTCCTGTCCATGTACCTGGTCACGGTGCTGGGAAAT
GTGCTCATCATCCTGGCCATCAGCTCTGATTCCCACCTGCACACCCCCATGTACTTCTTC
CTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAGATGCTG
GTGAACTTCCAGTCCCAGAACAAAGCCATCTCCTATGCAGGGTGTCTGACACAGCTCTAC
TTCCTGGTCTCCTTGGTGACCCTGGACAACCTCATCCTGGCCGTGATGGCGTATGATCGC
TATGTGGCCACCTGCTGCCCCCTCCACTATGTCACAGCCATGAGCCCTGGGCTCTGTGTC
TTGCTCCTCTCCTTGTGTTGGGGGCTGTCTGTTCTCTATGGCCTCCTCCTCACCTTCCTC
CTGACCAGGGTGACCTTCTGTGGGCCTCGAGAGATCCACTACCTCTTCTGTGACATGTAC
ATCCTGCTGTGGCTGGCATGTTCCAACACCCACATCATTCACACAGCGTTGATTGCCACT
GGCTGCTTCATCTTCCTCACCCCCTTAGGGTTCATGACCACATCCTATGTACGTATTGTC
AGAACCATCCTTCAAATGCCCTCGGCCTCTAAGAAATACAAAACCTTCTCTACCTGTGCC
TCCCATTTGGGTGTGGTCTCCCTCTTTTATGGGACGCTTGCTATGGTGTACCTGCAGCCC
CTCCATACCTACTCCATGAAGGACTCAGTAGCCACAGTGATGTATGCTGTGCTGACACCT
ATGATGAACCCTTTCATCTACAGCCTGAGGAACAAAGACATGCATGGGGCTCCGGGAAGA
GTCCTATGGAGACCCTTTCAGAGGCCTAAA

ORF Protein

Cloned ORF protein sequence for pF1KE0885 Download

>KIEE0885  330 aa
MRALNKHLLVLMLQKVGGMDGDNQSENSQFLLLGISESPEQQQILFWMFLSMYLVTVLGN
VLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLY
FLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFL
LTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIV
RTILQMPSASKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVLTP
MMNPFIYSLRNKDMHGAPGRVLWRPFQRPK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0885 Download

>pF1KE0885  4103 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGGGCACTT
AATAAACATTTGTTGGTGTTAATGTTACAGAAAGTTGGGGGAATGGATGGAGATAACCAG
AGTGAGAACTCACAGTTCCTTCTCCTGGGGATCTCAGAGAGTCCTGAGCAGCAGCAGATC
CTGTTTTGGATGTTCCTGTCCATGTACCTGGTCACGGTGCTGGGAAATGTGCTCATCATC
CTGGCCATCAGCTCTGATTCCCACCTGCACACCCCCATGTACTTCTTCCTGGCCAACCTC
TCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAGATGCTGGTGAACTTCCAG
TCCCAGAACAAAGCCATCTCCTATGCAGGGTGTCTGACACAGCTCTACTTCCTGGTCTCC
TTGGTGACCCTGGACAACCTCATCCTGGCCGTGATGGCGTATGATCGCTATGTGGCCACC
TGCTGCCCCCTCCACTATGTCACAGCCATGAGCCCTGGGCTCTGTGTCTTGCTCCTCTCC
TTGTGTTGGGGGCTGTCTGTTCTCTATGGCCTCCTCCTCACCTTCCTCCTGACCAGGGTG
ACCTTCTGTGGGCCTCGAGAGATCCACTACCTCTTCTGTGACATGTACATCCTGCTGTGG
CTGGCATGTTCCAACACCCACATCATTCACACAGCGTTGATTGCCACTGGCTGCTTCATC
TTCCTCACCCCCTTAGGGTTCATGACCACATCCTATGTACGTATTGTCAGAACCATCCTT
CAAATGCCCTCGGCCTCTAAGAAATACAAAACCTTCTCTACCTGTGCCTCCCATTTGGGT
GTGGTCTCCCTCTTTTATGGGACGCTTGCTATGGTGTACCTGCAGCCCCTCCATACCTAC
TCCATGAAGGACTCAGTAGCCACAGTGATGTATGCTGTGCTGACACCTATGATGAACCCT
TTCATCTACAGCCTGAGGAACAAAGACATGCATGGGGCTCCGGGAAGAGTCCTATGGAGA
CCCTTTCAGAGGCCTAAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT