ARID3C ORF clone FHC02454

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02454

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Clone info.

Species

human

Clone Name

pFN21AB7428 Sequence (with vector) Restriction Map

Product ID

FHC02454

Flexi Clone PID

FXC02454

ORF Sequence

DNA sequence (1236 bp)
Protein sequence (412 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463419]

Gene

KIBB7428

Symbol

ARID3C

Description

AT rich interactive domain 3C (BRIGHT-like)

Original Clone ID

oc00642

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1236 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 412 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35006.1 6e-87 100.0 ARID3C CCDS12050.1 3.8e-22 46.3 ARID3A CCDS10264.1 1.8e-20 42.9 ARID3B CCDS76777.1 1.8e-20 43.1 ARID3B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001606 112 201 PF01388 ARID/BRIGHT DNA-binding domain HMMSmart IPR001606 114 206 SM00501 ARID/BRIGHT DNA-binding domain ProfileScan IPR001606 113 205 PS51011 ARID/BRIGHT DNA-binding domain IPR023334 304 389 PS51486 REKLES domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005259571 593 603265 46.3 98.3 NP_005215 593 603265 46.3 98.3 XP_016881934 593 603265 46.3 98.3 XP_005259570 593 603265 46.3 98.3 NP_006456 560 612457 42.9 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7428 Download

>KIBB7428  1236 bp
ATGGAGGCCCTGCAGAAGCAGCAGGCAGCTCGGCTGGCCCAGGGGGTGGGGCCATTGGCC
CCTGCATGCCCGCTGCTGCCACCGCAGCCTCCCCTGCCTGACCACCGGACCCTACAGGCC
CCTGAGGGGGCCTTGGGGAATGTTGGGGCTGAGGAAGAGGAAGATGCTGAAGAAGATGAG
GAGAAGCGGGAGGAAGCCGGGGCAGAGGAGGAGGCAGCTGAGGAGAGCCGTCCAGGGGCC
CAGGGCCCCAGCTCGCCTTCTAGCCAGCCCCCTGGACTCCATCCCCACGAGTGGACCTAC
GAGGAACAATTCAAGCAGCTGTATGAGCTCGATGCAGACCCCAAGAGGAAGGAATTTCTG
GATGACCTGTTTAGCTTCATGCAAAAGAGGGGGACGCCAGTGAACCGCGTGCCCATCATG
GCGAAGCAGGTGCTCGACCTGTACGCTCTGTTTCGCCTGGTGACCGCCAAGGGCGGCCTG
GTGGAAGTCATCAACCGCAAAGTGTGGCGGGAAGTCACGCGCGGCCTCAGCCTACCCACC
ACCATCACCTCGGCCGCCTTCACTCTACGCACCCAGTACATGAAGTACCTGTACCCGTAC
GAGTGCGAGACTCGAGCGCTCAGCTCCCCAGGGGAGCTCCAGGCCGCCATAGACAGCAAT
CGGCGCGAGGGCCGTCGCCAGGCTTACACCGCTACTCCGCTCTTCGGCTTGGCAGGGCCG
CCCCCTCGGGGCGCTCAGGACCCAGCCTTGGGTCCCGGCCCCGCCCCTCCGGCGACCCAG
TCCAGCCCTGGCCCAGCCCAGGGTTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAG
CTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGGAATTCCAAACCCTTGTCTGGCACTG
CCTGTGGGCCTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAG
AAGAGAGCTGTGCTGATGGGGCCTATGGACCCACCTCGACCTTGCATGCCCCCCAGTTTC
CTGCCCCGTGGCAAGGTTCCCCTGAGGGAAGAGCGGCTGGATGGGCCTCTTAATCTGGCA
GGCAGTGGCATCAGCAGTATCAACATGGCCCTAGAGATCAACGGGGTGGTCTACACTGGT
GTCCTCTTTGCCCGCCGCCAGCCTGTGCCAGCTTCCCAGGGTCCAACCAACCCTGCACCC
CCACCCTCCACAGGGCCCCCTTCCAGCATCTTGCCC

ORF Protein

Cloned ORF protein sequence for pFN21AB7428 Download

>KIBB7428  412 aa
MEALQKQQAARLAQGVGPLAPACPLLPPQPPLPDHRTLQAPEGALGNVGAEEEEDAEEDE
EKREEAGAEEEAAEESRPGAQGPSSPSSQPPGLHPHEWTYEEQFKQLYELDADPKRKEFL
DDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPT
TITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDSNRREGRRQAYTATPLFGLAGP
PPRGAQDPALGPGPAPPATQSSPGPAQGSTSGLPAHACAQLSPSPIKKEESGIPNPCLAL
PVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLREERLDGPLNLA
GSGISSINMALEINGVVYTGVLFARRQPVPASQGPTNPAPPPSTGPPSSILP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7428 Download

>pFN21AB7428  5941 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGCCCTGCAGAAGCAGCAGGCAGCTCGGCT
GGCCCAGGGGGTGGGGCCATTGGCCCCTGCATGCCCGCTGCTGCCACCGCAGCCTCCCCT
GCCTGACCACCGGACCCTACAGGCCCCTGAGGGGGCCTTGGGGAATGTTGGGGCTGAGGA
AGAGGAAGATGCTGAAGAAGATGAGGAGAAGCGGGAGGAAGCCGGGGCAGAGGAGGAGGC
AGCTGAGGAGAGCCGTCCAGGGGCCCAGGGCCCCAGCTCGCCTTCTAGCCAGCCCCCTGG
ACTCCATCCCCACGAGTGGACCTACGAGGAACAATTCAAGCAGCTGTATGAGCTCGATGC
AGACCCCAAGAGGAAGGAATTTCTGGATGACCTGTTTAGCTTCATGCAAAAGAGGGGGAC
GCCAGTGAACCGCGTGCCCATCATGGCGAAGCAGGTGCTCGACCTGTACGCTCTGTTTCG
CCTGGTGACCGCCAAGGGCGGCCTGGTGGAAGTCATCAACCGCAAAGTGTGGCGGGAAGT
CACGCGCGGCCTCAGCCTACCCACCACCATCACCTCGGCCGCCTTCACTCTACGCACCCA
GTACATGAAGTACCTGTACCCGTACGAGTGCGAGACTCGAGCGCTCAGCTCCCCAGGGGA
GCTCCAGGCCGCCATAGACAGCAATCGGCGCGAGGGCCGTCGCCAGGCTTACACCGCTAC
TCCGCTCTTCGGCTTGGCAGGGCCGCCCCCTCGGGGCGCTCAGGACCCAGCCTTGGGTCC
CGGCCCCGCCCCTCCGGCGACCCAGTCCAGCCCTGGCCCAGCCCAGGGTTCCACCTCCGG
CCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGG
AATTCCAAACCCTTGTCTGGCACTGCCTGTGGGCCTGGCACTGGGACCTACACGGGAGAA
ATTGGCACCAGAGGAGCCCCCAGAGAAGAGAGCTGTGCTGATGGGGCCTATGGACCCACC
TCGACCTTGCATGCCCCCCAGTTTCCTGCCCCGTGGCAAGGTTCCCCTGAGGGAAGAGCG
GCTGGATGGGCCTCTTAATCTGGCAGGCAGTGGCATCAGCAGTATCAACATGGCCCTAGA
GATCAACGGGGTGGTCTACACTGGTGTCCTCTTTGCCCGCCGCCAGCCTGTGCCAGCTTC
CCAGGGTCCAACCAACCCTGCACCCCCACCCTCCACAGGGCCCCCTTCCAGCATCTTGCC
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T