OR52A5 ORF clone FHC02397

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Halotag ORF Clone FHC02397

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Clone info.

Species

human

Clone Name

pFN21AB7368 Sequence (with vector) Restriction Map

Product ID

FHC02397

Flexi Clone PID

FXC02397

ORF Sequence

DNA sequence (948 bp)
Protein sequence (316 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463976]

Gene

KIBB7368

Symbol

OR52A5

Alias : OR11-33

Description

olfactory receptor, family 52, subfamily A, member 5

Original Clone ID

oc00582

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 948 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 316 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31373.1 2.4e-82 100.0 OR52A5 CCDS31374.1 1.9e-61 74.8 OR52A1 CCDS44528.1 5.5e-42 51.8 OR52N4 CCDS31371.1 1.4e-41 53.5 OR52E2 CCDS31353.1 1.9e-40 52.1 OR52M1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000725 179 195 PR00245 Olfactory receptor IPR000725 239 248 PR00245 Olfactory receptor IPR000276 277 303 PR00237 GPCR IPR000725 288 299 PR00245 Olfactory receptor HMMPfam IPR000276 43 295 PF00001 GPCR ProfileScan IPR017452 43 295 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 PTFNGSVFMPSAFILIGIPGLES 24 SECONDARY 23 2 29 IGIPFSAMYLIGVIGNSLILVII 51 PRIMARY 23 3 63 IFLAMLAATDIALNTCILPKMLG 85 PRIMARY 23 4 115 GILLAMALDRYVAICIPLRHATI 137 SECONDARY 23 5 146 IGLGVTLRAAILIIPSLGLIKCC 168 PRIMARY 23 6 204 FVAFAILGFDIIFITLSYVQIFI 226 PRIMARY 23 7 241 FNTCIAHICVFLQFYLLAFFSFF 263 PRIMARY 23 8 273 PYIHILLSNLYLLVPPFLNPIVY 295 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 48.0 95.6 NP_689643 318 611267 49.5 96.8 XP_011514321 317 608497 30.3 92.4 NP_036501 317 608497 30.3 92.4 XP_011514322 317 608497 30.3 92.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7368 Download

>KIBB7368  948 bp
ATGCCGACATTCAATGGCTCAGTCTTCATGCCCTCTGCGTTTATACTAATTGGGATTCCT
GGTCTGGAGTCAGTGCAGTGTTGGATTGGGATTCCTTTCTCTGCCATGTATCTTATTGGT
GTGATTGGAAATTCCCTAATTTTAGTTATAATCAAATATGAAAACAGCCTCCATATACCC
ATGTACATTTTTTTGGCCATGTTGGCAGCCACAGACATTGCACTTAACACCTGCATTCTT
CCCAAAATGTTAGGCATCTTCTGGTTTCATTTGCCAGAGATTTCTTTTGATGCCTGTCTT
TTTCAAATGTGGCTTATTCACTCATTCCAGGCAATTGAATCGGGTATCCTTCTGGCAATG
GCCCTGGATCGCTATGTGGCCATCTGTATCCCCTTGAGACATGCCACCATCTTTTCCCAG
CAGTTCTTAACTCATATTGGACTTGGGGTGACACTCAGGGCTGCCATTCTTATAATACCT
TCCTTAGGGCTCATCAAATGCTGTCTGAAACACTATCGAACTACAGTCATCTCTCACTCT
TACTGTGAGCACATGGCCATCGTGAAGCTGGCTACTGAAGATATCCGAGTCAACAAGATA
TATGGCCTATTCGTTGCCTTTGCAATCCTAGGGTTTGACATAATATTTATAACCTTGTCC
TATGTCCAAATTTTTATCACTGTCTTTCAGCTGCCCCAGAAGGAGGCACGATTCAAGGCC
TTTAATACATGCATTGCCCACATTTGTGTCTTCCTACAGTTCTACCTTCTTGCCTTCTTC
TCTTTCTTCACACACAGGTTTGGTTCACACATACCACCATATATTCATATCCTCTTGTCA
AATCTTTACCTGTTAGTCCCACCTTTTCTCAACCCTATTGTCTATGGAGTGAAGACCAAG
CAAATTCGTGACCATATTGTGAAAGTGTTTTTCTTCAAAAAAGTAACT

ORF Protein

Cloned ORF protein sequence for pFN21AB7368 Download

>KIBB7368  316 aa
MPTFNGSVFMPSAFILIGIPGLESVQCWIGIPFSAMYLIGVIGNSLILVIIKYENSLHIP
MYIFLAMLAATDIALNTCILPKMLGIFWFHLPEISFDACLFQMWLIHSFQAIESGILLAM
ALDRYVAICIPLRHATIFSQQFLTHIGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHS
YCEHMAIVKLATEDIRVNKIYGLFVAFAILGFDIIFITLSYVQIFITVFQLPQKEARFKA
FNTCIAHICVFLQFYLLAFFSFFTHRFGSHIPPYIHILLSNLYLLVPPFLNPIVYGVKTK
QIRDHIVKVFFFKKVT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7368 Download

>pFN21AB7368  5653 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCGACATTCAATGGCTCAGTCTTCATGCCCTC
TGCGTTTATACTAATTGGGATTCCTGGTCTGGAGTCAGTGCAGTGTTGGATTGGGATTCC
TTTCTCTGCCATGTATCTTATTGGTGTGATTGGAAATTCCCTAATTTTAGTTATAATCAA
ATATGAAAACAGCCTCCATATACCCATGTACATTTTTTTGGCCATGTTGGCAGCCACAGA
CATTGCACTTAACACCTGCATTCTTCCCAAAATGTTAGGCATCTTCTGGTTTCATTTGCC
AGAGATTTCTTTTGATGCCTGTCTTTTTCAAATGTGGCTTATTCACTCATTCCAGGCAAT
TGAATCGGGTATCCTTCTGGCAATGGCCCTGGATCGCTATGTGGCCATCTGTATCCCCTT
GAGACATGCCACCATCTTTTCCCAGCAGTTCTTAACTCATATTGGACTTGGGGTGACACT
CAGGGCTGCCATTCTTATAATACCTTCCTTAGGGCTCATCAAATGCTGTCTGAAACACTA
TCGAACTACAGTCATCTCTCACTCTTACTGTGAGCACATGGCCATCGTGAAGCTGGCTAC
TGAAGATATCCGAGTCAACAAGATATATGGCCTATTCGTTGCCTTTGCAATCCTAGGGTT
TGACATAATATTTATAACCTTGTCCTATGTCCAAATTTTTATCACTGTCTTTCAGCTGCC
CCAGAAGGAGGCACGATTCAAGGCCTTTAATACATGCATTGCCCACATTTGTGTCTTCCT
ACAGTTCTACCTTCTTGCCTTCTTCTCTTTCTTCACACACAGGTTTGGTTCACACATACC
ACCATATATTCATATCCTCTTGTCAAATCTTTACCTGTTAGTCCCACCTTTTCTCAACCC
TATTGTCTATGGAGTGAAGACCAAGCAAATTCGTGACCATATTGTGAAAGTGTTTTTCTT
CAAAAAAGTAACTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT