OR52A5 ORF clone FXC02397

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Flexi ORF Clone FXC02397

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Clone info.

Species

human

Clone Name

pF1KB7368 Sequence (with vector) Restriction Map

Product ID

FXC02397

HaloTag Clone PID

FHC02397

ORF Sequence

DNA sequence (948 bp)
Protein sequence (316 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463976]

Gene

KIBB7368

Symbol

OR52A5

Alias : OR11-33

Description

olfactory receptor, family 52, subfamily A, member 5

Original Clone ID

oc00582

Features of the cloned ORF sequence

Description

Length: 948 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 316 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31373.1 2.4e-82 100.0 OR52A5 CCDS31374.1 1.9e-61 74.8 OR52A1 CCDS44528.1 5.5e-42 51.8 OR52N4 CCDS31371.1 1.4e-41 53.5 OR52E2 CCDS31353.1 1.9e-40 52.1 OR52M1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000725 179 195 PR00245 Olfactory receptor IPR000725 239 248 PR00245 Olfactory receptor IPR000276 277 303 PR00237 GPCR IPR000725 288 299 PR00245 Olfactory receptor HMMPfam IPR000276 43 295 PF00001 GPCR ProfileScan IPR017452 43 295 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 PTFNGSVFMPSAFILIGIPGLES 24 SECONDARY 23 2 29 IGIPFSAMYLIGVIGNSLILVII 51 PRIMARY 23 3 63 IFLAMLAATDIALNTCILPKMLG 85 PRIMARY 23 4 115 GILLAMALDRYVAICIPLRHATI 137 SECONDARY 23 5 146 IGLGVTLRAAILIIPSLGLIKCC 168 PRIMARY 23 6 204 FVAFAILGFDIIFITLSYVQIFI 226 PRIMARY 23 7 241 FNTCIAHICVFLQFYLLAFFSFF 263 PRIMARY 23 8 273 PYIHILLSNLYLLVPPFLNPIVY 295 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 48.0 95.6 NP_689643 318 611267 49.5 96.8 XP_011514321 317 608497 30.3 92.4 NP_036501 317 608497 30.3 92.4 XP_011514322 317 608497 30.3 92.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7368 Download

>KIBB7368  948 bp
ATGCCGACATTCAATGGCTCAGTCTTCATGCCCTCTGCGTTTATACTAATTGGGATTCCT
GGTCTGGAGTCAGTGCAGTGTTGGATTGGGATTCCTTTCTCTGCCATGTATCTTATTGGT
GTGATTGGAAATTCCCTAATTTTAGTTATAATCAAATATGAAAACAGCCTCCATATACCC
ATGTACATTTTTTTGGCCATGTTGGCAGCCACAGACATTGCACTTAACACCTGCATTCTT
CCCAAAATGTTAGGCATCTTCTGGTTTCATTTGCCAGAGATTTCTTTTGATGCCTGTCTT
TTTCAAATGTGGCTTATTCACTCATTCCAGGCAATTGAATCGGGTATCCTTCTGGCAATG
GCCCTGGATCGCTATGTGGCCATCTGTATCCCCTTGAGACATGCCACCATCTTTTCCCAG
CAGTTCTTAACTCATATTGGACTTGGGGTGACACTCAGGGCTGCCATTCTTATAATACCT
TCCTTAGGGCTCATCAAATGCTGTCTGAAACACTATCGAACTACAGTCATCTCTCACTCT
TACTGTGAGCACATGGCCATCGTGAAGCTGGCTACTGAAGATATCCGAGTCAACAAGATA
TATGGCCTATTCGTTGCCTTTGCAATCCTAGGGTTTGACATAATATTTATAACCTTGTCC
TATGTCCAAATTTTTATCACTGTCTTTCAGCTGCCCCAGAAGGAGGCACGATTCAAGGCC
TTTAATACATGCATTGCCCACATTTGTGTCTTCCTACAGTTCTACCTTCTTGCCTTCTTC
TCTTTCTTCACACACAGGTTTGGTTCACACATACCACCATATATTCATATCCTCTTGTCA
AATCTTTACCTGTTAGTCCCACCTTTTCTCAACCCTATTGTCTATGGAGTGAAGACCAAG
CAAATTCGTGACCATATTGTGAAAGTGTTTTTCTTCAAAAAAGTAACT

ORF Protein

Cloned ORF protein sequence for pF1KB7368 Download

>KIBB7368  316 aa
MPTFNGSVFMPSAFILIGIPGLESVQCWIGIPFSAMYLIGVIGNSLILVIIKYENSLHIP
MYIFLAMLAATDIALNTCILPKMLGIFWFHLPEISFDACLFQMWLIHSFQAIESGILLAM
ALDRYVAICIPLRHATIFSQQFLTHIGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHS
YCEHMAIVKLATEDIRVNKIYGLFVAFAILGFDIIFITLSYVQIFITVFQLPQKEARFKA
FNTCIAHICVFLQFYLLAFFSFFTHRFGSHIPPYIHILLSNLYLLVPPFLNPIVYGVKTK
QIRDHIVKVFFFKKVT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7368 Download

>pF1KB7368  4061 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGACATTC
AATGGCTCAGTCTTCATGCCCTCTGCGTTTATACTAATTGGGATTCCTGGTCTGGAGTCA
GTGCAGTGTTGGATTGGGATTCCTTTCTCTGCCATGTATCTTATTGGTGTGATTGGAAAT
TCCCTAATTTTAGTTATAATCAAATATGAAAACAGCCTCCATATACCCATGTACATTTTT
TTGGCCATGTTGGCAGCCACAGACATTGCACTTAACACCTGCATTCTTCCCAAAATGTTA
GGCATCTTCTGGTTTCATTTGCCAGAGATTTCTTTTGATGCCTGTCTTTTTCAAATGTGG
CTTATTCACTCATTCCAGGCAATTGAATCGGGTATCCTTCTGGCAATGGCCCTGGATCGC
TATGTGGCCATCTGTATCCCCTTGAGACATGCCACCATCTTTTCCCAGCAGTTCTTAACT
CATATTGGACTTGGGGTGACACTCAGGGCTGCCATTCTTATAATACCTTCCTTAGGGCTC
ATCAAATGCTGTCTGAAACACTATCGAACTACAGTCATCTCTCACTCTTACTGTGAGCAC
ATGGCCATCGTGAAGCTGGCTACTGAAGATATCCGAGTCAACAAGATATATGGCCTATTC
GTTGCCTTTGCAATCCTAGGGTTTGACATAATATTTATAACCTTGTCCTATGTCCAAATT
TTTATCACTGTCTTTCAGCTGCCCCAGAAGGAGGCACGATTCAAGGCCTTTAATACATGC
ATTGCCCACATTTGTGTCTTCCTACAGTTCTACCTTCTTGCCTTCTTCTCTTTCTTCACA
CACAGGTTTGGTTCACACATACCACCATATATTCATATCCTCTTGTCAAATCTTTACCTG
TTAGTCCCACCTTTTCTCAACCCTATTGTCTATGGAGTGAAGACCAAGCAAATTCGTGAC
CATATTGTGAAAGTGTTTTTCTTCAAAAAAGTAACTGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT