STARD3 ORF clone FHC08393

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC08393

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Clone info.

Species

human

Clone Name

pFN21AE4429 Sequence (with vector) Restriction Map

Product ID

FHC08393

ORF Sequence

DNA sequence (1335 bp)
Protein sequence (445 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4429

Symbol

STARD3

Alias : CAB1, MLN64, es64

Description

StAR-related lipid transfer (START) domain containing 3, transcript variant 1

Original Clone ID

oc94429

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1335 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 445 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11341.1 5.5e-198 99.8 STARD3 CCDS54117.1 5.3e-167 86.8 STARD3 CCDS54118.1 2e-134 95.7 STARD3 CCDS5455.1 1.9e-53 57.6 STARD3NL CCDS6102.1 2.6e-28 37.5 STAR The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000799 296 315 PR00978 Steroidogenic acute regulatory protein IPR000799 315 332 PR00978 Steroidogenic acute regulatory protein IPR000799 332 352 PR00978 Steroidogenic acute regulatory protein IPR000799 354 372 PR00978 Steroidogenic acute regulatory protein IPR000799 404 423 PR00978 Steroidogenic acute regulatory protein IPR000799 424 445 PR00978 Steroidogenic acute regulatory protein HMMPfam IPR019498 47 214 PF10457 MENTAL domain IPR002913 241 442 PF01852 Lipid-binding START HMMSmart IPR002913 239 444 SM00234 Lipid-binding START ProfileScan IPR019498 46 217 PS51439 MENTAL domain IPR002913 248 443 PS50848 Lipid-binding START
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 52 TFCLFVTFDLLFISLLWIIELNT 74 SECONDARY 23 2 94 SFFDIFVLAFFRFSGLLLGYAVL 116 PRIMARY 23 3 123 VIAVTTLVSSAFLIVKVILSELL 145 PRIMARY 23 4 148 GAFGYLLPIVSFVLAWLETWFLD 170 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006795 445 607048 99.8 100.0 XP_016879530 445 607048 99.8 100.0 XP_011522512 501 607048 99.8 92.4 XP_011522513 501 607048 99.8 92.4 NP_001159409 445 607048 86.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4429 Download

>KIEE4429  1335 bp
ATGAGCAAGCTGCCCAGGGAGCTGACCCGAGACTTGGAGCGCAGCCTGCCTGCCGTGGCC
TCCCTGGGCTCCTCACTGTCCCACAGCCAGAGCCTCTCCTCGCACCTCCTTCCGCCGCCT
GAGAAGCGAAGGGCCATCTCTGATGTCCGCCGCACCTTCTGTCTCTTCGTCACCTTCGAC
CTGCTCTTCATCTCCCTGCTCTGGATCATCGAACTGAATACCAACACAGGCATCCGTAAG
AACTTGGAGCAGGAGATCATCCAGTACAACTTTAAAACTTCCTTCTTCGACATCTTTGTC
CTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCAGCTCCGGCAC
TGGTGGGTGATTGCGGTCACGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATC
CTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCCATCGTCTCTTTTGTC
CTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAG
GAGCGATGGTATCTTGCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGT
GCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAATCCTTTGCAGGGTCTGACAATGAA
TCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGC
CAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAG
TTTGAGAAGAATAATGAATATGGGGACACCGTGTACACCATTGAAGTTCCCTTTCACGGC
AAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTG
ATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTG
CAGCGAGTGGAAGACAACACCCTCATCTCCTATGACGTGTCTGCAGGGGCTGCGGGCGGC
GTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATAC
TTGTCATCAGGGATCGCCACCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGG
GGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACCCCCGTGTTTGC
ACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCAC
CAGAGCCTCGCGGCCACCATGTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAG
CTGGGGGCCCGGGCG

ORF Protein

Cloned ORF protein sequence for pFN21AE4429 Download

>KIEE4429  445 aa
MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRRAISDVRRTFCLFVTFD
LLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLQLRH
WWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEE
ERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAGSDNESDEEVAGKKSFSAQEREYIR
QGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEV
ILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRY
LSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIH
QSLAATMFEFAFHLRQRISELGARA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4429 Download

>pFN21AE4429  6040 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCAAGCTGCCCAGGGAGCTGACCCGAGACTT
GGAGCGCAGCCTGCCTGCCGTGGCCTCCCTGGGCTCCTCACTGTCCCACAGCCAGAGCCT
CTCCTCGCACCTCCTTCCGCCGCCTGAGAAGCGAAGGGCCATCTCTGATGTCCGCCGCAC
CTTCTGTCTCTTCGTCACCTTCGACCTGCTCTTCATCTCCCTGCTCTGGATCATCGAACT
GAATACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAA
AACTTCCTTCTTCGACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGG
CTATGCCGTGCTGCAGCTCCGGCACTGGTGGGTGATTGCGGTCACGACGCTGGTGTCCAG
TGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTA
CCTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAA
AGTCCTACCCCAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCGCCCAGGTTGCTGTTGC
CCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGA
ATCCTTTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTC
TGCTCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGAT
CTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTA
CACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCC
TGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAA
GACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGA
CGTGTCTGCAGGGGCTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCG
CATTGAGCGGCGCAGGGACCGATACTTGTCATCAGGGATCGCCACCTCACACAGTGCCAA
GCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAA
GTCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGG
CCGCCTGCCCCGGTACCTCATCCACCAGAGCCTCGCGGCCACCATGTTTGAATTTGCCTT
TCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCGGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT