CPEB3 ORF clone FHC00691

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC00691

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Clone info.

Species

human

Clone Name

pFN21ASDA0940 Sequence (with vector) Restriction Map

Product ID

FHC00691

Flexi Clone PID

FXC00691

ORF Sequence

DNA sequence (2052 bp)
Protein sequence (684 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384052]

Gene

KIAA0940

Symbol

CPEB3

Description

cytoplasmic polyadenylation element binding protein 3, transcript variant 2

Original Clone ID

hh04894

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2052 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 684 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53553.1 2.7e-110 100.0 CPEB3 CCDS31246.1 1.7e-56 95.3 CPEB3 CCDS56326.1 1.1e-50 62.1 CPEB2 CCDS4390.1 1.5e-50 60.6 CPEB4 CCDS56325.1 2.5e-47 59.7 CPEB2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 429 490 PF00076 RNA recognition motif domain HMMSmart IPR000504 428 500 SM00360 RNA recognition motif domain IPR000504 536 609 SM00360 RNA recognition motif domain ProfileScan IPR000504 427 514 PS50102 RNA recognition motif domain IPR000504 535 613 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001171608 684 610606 100.0 100.0 XP_005269687 684 610606 100.0 100.0 XP_011537817 692 610606 98.7 100.0 XP_011537822 598 610606 87.4 100.0 NP_001170855 999 610605 62.8 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0940 Download

>KIAA0940  2052 bp
ATGCAGGATGATTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCCCCAGCAGCAGCAG
CGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTATCCGAAGCCCCGTCCACGCCCCTC
TCCTCAGAGACCCCCAAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGCCCAGCCGCT
GCCCCCCCGGCCCCCAACGGCCCGGACAAGATGCAGATGGAATCACCGCTCCTGCCAGGC
TTGAGTTTCCATCAGCCTCCTCAGCAGCCGCCGCCGCCTCAGGAGCCCGCGGCACCGGGC
GCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAG
GACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCG
CACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACC
CAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCCAGCGCAG
CCACCACAGGCGCAGCCCCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCCAGGCGCCC
TACGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCG
TCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCCTCGTCC
AGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGC
GGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGGTCGGTGTGGGCGTGGGTGTGGGTGTC
GGGGTGCCTTCCCCGCTCAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAGCAACGTG
ATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGAT
AACGCTTTCCGGACCGATAATGGTAACAATCTGTTGCCATTTCAGGACCGGAGTAGGCCC
TATGATACTTTTAACTTGCACTCGTTGGAGAACTCCTTAATGGATATGATAAGGACTGAT
CATGAACCTCTGAAAGGACGCATGGGGATAAATTTCCATCATCCAGGAACAGATAATATT
ATGGCACTTAACAGTCGATCTTCTCTCTTTCCCTTTGAAGATGCCTTCCTGGATGATAGC
CATGGTGATCAAGCCTTGTCATCTGGCTTAAGTTCTCCCACTCGCTGTCAAAATGGGGAA
CGAGTAGAACGCTACTCTAGAAAGGTGTTTGTTGGAGGACTTCCTCCTGATATTGATGAA
GATGAGATCACTGCCAGCTTTCGCAGGTTTGGACCTCTCGTAGTAGACTGGCCTCACAAA
GCTGAAAGCAAGTCTTATTTTCCTCCTAAAGGCTATGCCTTTCTGCTGTTCCAAGAGGAA
AGCTCAGTACAAGCTTTGATAGATGCCTGCCTAGAAGAAGATGGGAAACTCTACCTGTGT
GTGTCAAGCCCCACCATCAAGGACAAGCCAGTGCAAATTCGACCATGGAACCTAAGTGAC
AGTGACTTTGTAATGGATGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTTGTTGGG
GGAGTTCCACGACCCCTTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTACGGT
GGTGTCTGCTATGCTGGCATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGTGCTGGC
CGCGTGGCATTCTCCAATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGCAG
CTTCAGCACAATGACATTGACAAACGGGTTGAAGTAAAGCCATATGTGCTGGATGATCAG
ATGTGTGATGAGTGCCAGGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCC
AACGTCACCTGTCTGCAGTATTACTGTGAATACTGCTGGGCGAGCATACATTCCCGAGCC
GGGCGGGAGTTCCACAAACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCACGTCCCG
TTCCGCTGGAGC

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0940 Download

>KIAA0940  684 aa
MQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETPKPEENSAVPALSPAA
APPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWSTGTTNAVE
DSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPAPQPAQPAQ
PPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASS
SWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNV
IAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRTD
HEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGE
RVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEE
SSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVG
GVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQ
LQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRA
GREFHKPLVKEGGDRPRHVPFRWS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0940 Download

>pFN21ASDA0940  6781 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGCAGGATGATTTACT
GATGGACAAAAGCAAAACCCAGCCCCAGCCCCAGCAGCAGCAGCGGCAGCAGCAGCAGCC
CCAACCTGAGTCCAGCGTATCCGAAGCCCCGTCCACGCCCCTCTCCTCAGAGACCCCCAA
GCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGCCCAGCCGCTGCCCCCCCGGCCCCCAA
CGGCCCGGACAAGATGCAGATGGAATCACCGCTCCTGCCAGGCTTGAGTTTCCATCAGCC
TCCTCAGCAGCCGCCGCCGCCTCAGGAGCCCGCGGCACCGGGCGCGTCGCTGTCGCCGTC
CTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCTTCCAGGG
GATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGT
CTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCC
GCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCCAGCGCAGCCACCACAGGCGCAGCC
CCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCCAGGCGCCCTACGCGCAGAGGAGCGC
CGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTCGGCGGT
TGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCA
AAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCG
GGACCCTCGCCGGGCGGTCGGTGTGGGCGTGGGTGTGGGTGTCGGGGTGCCTTCCCCGCT
CAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAGCAACGTGATCGCGCCGCCCAAGTT
CCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGATAACGCTTTCCGGACCGA
TAATGGTAACAATCTGTTGCCATTTCAGGACCGGAGTAGGCCCTATGATACTTTTAACTT
GCACTCGTTGGAGAACTCCTTAATGGATATGATAAGGACTGATCATGAACCTCTGAAAGG
ACGCATGGGGATAAATTTCCATCATCCAGGAACAGATAATATTATGGCACTTAACAGTCG
ATCTTCTCTCTTTCCCTTTGAAGATGCCTTCCTGGATGATAGCCATGGTGATCAAGCCTT
GTCATCTGGCTTAAGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGTAGAACGCTACTC
TAGAAAGGTGTTTGTTGGAGGACTTCCTCCTGATATTGATGAAGATGAGATCACTGCCAG
CTTTCGCAGGTTTGGACCTCTCGTAGTAGACTGGCCTCACAAAGCTGAAAGCAAGTCTTA
TTTTCCTCCTAAAGGCTATGCCTTTCTGCTGTTCCAAGAGGAAAGCTCAGTACAAGCTTT
GATAGATGCCTGCCTAGAAGAAGATGGGAAACTCTACCTGTGTGTGTCAAGCCCCACCAT
CAAGGACAAGCCAGTGCAAATTCGACCATGGAACCTAAGTGACAGTGACTTTGTAATGGA
TGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTTGTTGGGGGAGTTCCACGACCCCT
TCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTACGGTGGTGTCTGCTATGCTGG
CATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGTGCTGGCCGCGTGGCATTCTCCAA
TCAGCAGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGCAGCTTCAGCACAATGACAT
TGACAAACGGGTTGAAGTAAAGCCATATGTGCTGGATGATCAGATGTGTGATGAGTGCCA
GGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGCA
GTATTACTGTGAATACTGCTGGGCGAGCATACATTCCCGAGCCGGGCGGGAGTTCCACAA
ACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTGGAGCTACGT
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T