TBR1 ORF clone FXC11886

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Flexi ORF Clone FXC11886

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Clone info.

Species

human

Clone Name

pF1KB9655 Sequence (with vector) Restriction Map

Product ID

FXC11886

HaloTag Clone PID

FHC11886

ORF Sequence

DNA sequence (2046 bp)
Protein sequence (682 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529217]

Gene

KIBB9655

Symbol

TBR1

Alias : IDDAS, TBR-1, TES-56

Description

T-box, brain, 1

Original Clone ID

cs00200

Features of the cloned ORF sequence

Description

Length: 2046 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 682 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33310.1 3.5e-202 100.0 TBR1 CCDS63585.1 6.1e-59 52.6 EOMES CCDS2646.1 3e-50 50.4 EOMES CCDS63584.1 2.6e-48 56.4 EOMES CCDS11514.1 4.2e-44 42.8 TBX21 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001699 221 245 PR00937 Transcription factor IPR001699 287 300 PR00937 Transcription factor IPR001699 304 313 PR00937 Transcription factor IPR001699 326 340 PR00937 Transcription factor IPR001699 364 377 PR00937 Transcription factor IPR001699 385 393 PR00937 Transcription factor HMMPfam IPR001699 205 394 PF00907 Transcription factor HMMSmart IPR001699 203 398 SM00425 Transcription factor ProfileScan IPR001699 208 393 PS50252 Transcription factor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006584 682 604616 100.0 100.0 NP_001265111 705 604615 52.6 86.1 NP_005433 686 604615 50.4 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9655 Download

>KIBB9655  2046 bp
ATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTG
AGCAGCAGCTACCCACATTCAGGCGGATCCGAGCTTGTCTTGCACGATCATCCCATTATC
TCGACCACTGACAACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACG
AATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGA
AGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCT
GCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCC
AGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGC
AGCCCTAGCCGCTACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTC
CTGTCCAACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTAC
GGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTG
CCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCAC
CAAACGGAGATGATCATCACCAAACAGGGAAGGCGCATGTTTCCTTTTTTAAGTTTTAAC
ATTTCTGGTCTCGATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGAT
CCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAAT
GTGCAAGGAAATCGGGTCTATATGCATCCGGATTCCCCCAACACTGGGGCTCACTGGATG
CGCCAAGAAATCTCTTTTGGAAAATTAAAACTTACGAACAACAAAGGAGCTTCAAATAAC
AATGGGCAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTG
GAAGTGAACGAGGACGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCAGACGTTCACT
TTCCCTGAGACTCAGTTCATCGCCGTCACCGCCTACCAGAACACGGATATTACACAACTG
AAAATAGATCACAACCCTTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACC
GGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTG
CCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTAC
GCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGTACGGACCGCAGC
GTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCG
CCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTAT
GACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGC
GTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCACTGGCCGCCCGCTCGGCTACTACGCC
GACCCGTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCG
GTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAATCCC
TACCTGGGCGAGGAGGCCGAGGGCCTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCC
GCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTCCTCG
ATCAAGTCCATCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATC
TCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCC
CAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATTAGCGGCTACTATGGCTTCTACTCG
CACAGC

ORF Protein

Cloned ORF protein sequence for pF1KB9655 Download

>KIBB9655  682 aa
MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMT
NQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAP
SAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQY
GHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFN
ISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWM
RQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEVNEDGTEDTSQPGRVQTFT
FPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIV
PGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPS
PQRWFVTPANNRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYA
DPSGWGARSPPQYCGTKSGSVLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGA
AEDAKPKDLSDSSWIETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLA
QRDCEKNCAKDISGYYGFYSHS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9655 Download

>pF1KB9655  5159 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCAGCTGGAG
CACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTAC
CCACATTCAGGCGGATCCGAGCTTGTCTTGCACGATCATCCCATTATCTCGACCACTGAC
AACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACGAATCAGTCAGAT
ACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCT
CCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCGC
TACCTCCTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTC
CCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGCAGCCCTAGCCGC
TACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTCCTGTCCAACTCC
TCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTAC
CAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTGCCCGGCAAAGCA
CAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATG
ATCATCACCAAACAGGGAAGGCGCATGTTTCCTTTTTTAAGTTTTAACATTTCTGGTCTC
GATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGATCCCAATCACTGG
AGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGAAAT
CGGGTCTATATGCATCCGGATTCCCCCAACACTGGGGCTCACTGGATGCGCCAAGAAATC
TCTTTTGGAAAATTAAAACTTACGAACAACAAAGGAGCTTCAAATAACAATGGGCAGATG
GTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAG
GACGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCAGACGTTCACTTTCCCTGAGACT
CAGTTCATCGCCGTCACCGCCTACCAGAACACGGATATTACACAACTGAAAATAGATCAC
AACCCTTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACCGGCTGTGACATG
GACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGC
TACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGC
TTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGTACGGACCGCAGCGTGCCGCACACC
AACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGG
TTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACG
GACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGCTG
CCGCTGCAGGCTGCAGGCTGCACTGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGC
TGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGC
TGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAATCCCTACCTGGGCGAG
GAGGCCGAGGGCCTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCCGCCGAGGACGCC
AAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTCCTCGATCAAGTCCATC
GACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCCGAC
ACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGC
GAGAAGAACTGCGCCAAGGACATTAGCGGCTACTATGGCTTCTACTCGCACAGCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT