DERL2 ORF clone FXC01845

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Flexi ORF Clone FXC01845

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Clone info.

Species

human

Clone Name

pF1KB9027 Sequence (with vector) Restriction Map

Product ID

FXC01845

HaloTag Clone PID

FHC01845

Original Clone PID

ORK01845

ORF Sequence

DNA sequence (717 bp)
Protein sequence (239 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385189]

Gene

KIBB9027

Symbol

DERL2

Alias : CGI-101, DERtrin-2, F-LAN-1, F-LANa, FLANa, derlin-2

Description

derlin 2, transcript variant 1

Original Clone ID

fj00658

Features of the cloned ORF sequence

Description

Length: 717 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 239 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11073.1 3.5e-103 100.0 DERL2 CCDS33615.1 1e-78 78.0 DERL3 CCDS42986.1 3.6e-71 79.0 DERL3 CCDS46672.1 4.1e-71 79.0 DERL3 CCDS6337.1 1.9e-26 35.5 DERL1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007599 13 202 PF04511 Derlin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 23 ACVLTTAAVQLELITPFQLYFNP 45 SECONDARY 23 2 56 RLITNFLFFGPVGFNFLFNMIFL 78 SECONDARY 23 3 103 FGGFLMTLFGLFVSLVFLGQAFT 125 PRIMARY 23 4 162 SLLLGNSIIVDLLGIAVGHIYFF 184 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057125 239 610304 100.0 100.0 NP_001291706 238 610304 99.6 100.0 NP_001002862 235 610305 78.0 95.0 XP_011528807 234 610305 77.5 95.0 XP_011528808 233 610305 78.7 86.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9027 Download

>KIBB9027  717 bp
ATGGCGTACCAGAGCTTGCGGCTGGAGTACCTGCAGATCCCACCGGTCAGCCGCGCCTAC
ACCACTGCCTGCGTCCTCACCACCGCCGCCGTGCAGTTGGAATTGATCACACCTTTTCAG
TTGTACTTCAATCCTGAATTAATCTTTAAACACTTTCAAATATGGAGATTAATCACCAAC
TTCTTATTTTTTGGGCCAGTTGGATTCAATTTTTTATTTAACATGATTTTTCTATATCGT
TACTGTCGAATGCTAGAAGAAGGCTCTTTCCGAGGTCGGACAGCAGACTTTGTATTTATG
TTCCTTTTTGGTGGATTCTTAATGACCCTTTTTGGTCTGTTTGTGAGCTTAGTTTTCTTG
GGCCAGGCCTTTACAATAATGCTCGTCTATGTGTGGAGCCGAAGGAACCCCTATGTCCGC
ATGAACTTCTTCGGCCTTCTCAACTTCCAGGCCCCCTTTCTGCCCTGGGTGCTCATGGGA
TTTTCCTTGTTGTTGGGGAACTCAATCATTGTGGACCTTTTGGGTATTGCAGTTGGACAC
ATATATTTTTTCTTGGAAGATGTATTTCCCAATCAACCTGGTGGAATAAGAATTCTGAAA
ACACCATCTATTTTGAAAGCTATTTTTGATACACCAGATGAGGATCCAAATTACAATCCA
CTACCTGAGGAACGGCCAGGAGGCTTCGCCTGGGGTGAGGGCCAGCGGCTTGGAGGT

ORF Protein

Cloned ORF protein sequence for pF1KB9027 Download

>KIBB9027  239 aa
MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9027 Download

>pF1KB9027  3830 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGTACCAG
AGCTTGCGGCTGGAGTACCTGCAGATCCCACCGGTCAGCCGCGCCTACACCACTGCCTGC
GTCCTCACCACCGCCGCCGTGCAGTTGGAATTGATCACACCTTTTCAGTTGTACTTCAAT
CCTGAATTAATCTTTAAACACTTTCAAATATGGAGATTAATCACCAACTTCTTATTTTTT
GGGCCAGTTGGATTCAATTTTTTATTTAACATGATTTTTCTATATCGTTACTGTCGAATG
CTAGAAGAAGGCTCTTTCCGAGGTCGGACAGCAGACTTTGTATTTATGTTCCTTTTTGGT
GGATTCTTAATGACCCTTTTTGGTCTGTTTGTGAGCTTAGTTTTCTTGGGCCAGGCCTTT
ACAATAATGCTCGTCTATGTGTGGAGCCGAAGGAACCCCTATGTCCGCATGAACTTCTTC
GGCCTTCTCAACTTCCAGGCCCCCTTTCTGCCCTGGGTGCTCATGGGATTTTCCTTGTTG
TTGGGGAACTCAATCATTGTGGACCTTTTGGGTATTGCAGTTGGACACATATATTTTTTC
TTGGAAGATGTATTTCCCAATCAACCTGGTGGAATAAGAATTCTGAAAACACCATCTATT
TTGAAAGCTATTTTTGATACACCAGATGAGGATCCAAATTACAATCCACTACCTGAGGAA
CGGCCAGGAGGCTTCGCCTGGGGTGAGGGCCAGCGGCTTGGAGGTGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTA
ACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTG
AAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGC
GGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAG
CAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAA
GAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGC
CAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGC
GCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTA
CACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAG
AAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCT
TCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGA
GCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGC
GGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTT
ATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT