PPAPDC3 ORF clone FXC01816

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Flexi ORF Clone FXC01816

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Clone info.

Species

human

Clone Name

pF1KB5445 Sequence (with vector) Restriction Map

Product ID

FXC01816

HaloTag Clone PID

FHC01816

Original Clone PID

ORK01816

ORF Sequence

DNA sequence (813 bp)
Protein sequence (271 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385550]

Gene

KIBB5445

Symbol

PPAPDC3

Description

phosphatidic acid phosphatase type 2 domain containing 3

Original Clone ID

bm05381

Features of the cloned ORF sequence

Description

Length: 813 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 271 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6942.1 1.6e-88 99.6 PLPP7 CCDS34981.1 1e-37 49.6 PLPP6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000326 145 258 PF01569 Phosphatidic acid phosphatase type 2/haloperoxidase HMMSmart IPR000326 143 255 SM00014 Phosphatidic acid phosphatase type 2/haloperoxidase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 114 KLIGITGHGIPWIGGTILCLVKS 136 SECONDARY 23 2 143 EVLMNLLLALLLDIMTVAGVQKL 165 PRIMARY 23 3 204 FLSHLVLAVPLRVLLVLWALCVG 226 PRIMARY 23 4 243 GFVIGYLQFRLVELVWMPSSTCQ 265 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_982278 295 611666 49.6 98.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5445 Download

>KIBB5445  813 bp
ATGCCAGCTTCCCAGAGCCGGGCCCGTGCCCGGGACCGCAACAACGTCCTCAACCGGGCT
GAGTTCCTGTCCCTGAACCAGCCCCCCAAGGGGGGCCCGGAGCCCCGCAGCTCGGGCAGA
AAGGCCTCGGGCCCATCAGCACAGCCCCCACCTGCTGGTGACGGGGCCAGAGAGCGACGC
CAGTCACAGCAGCTGCCAGAGGAGGACTGCATGCAGCTGAACCCCTCCTTCAAGGGCATC
GCCTTCAACTCCCTGCTGGCCATCGATATCTGTATGTCCAAGCGGCTGGGGGTGTGCGCT
GGCCGGGCGGCGTCCTGGGCCAGTGCCCGCTCCATGGTCAAGCTCATCGGCATCACGGGC
CACGGCATCCCCTGGATCGGAGGCACCATCCTCTGCCTGGTGAAGAGCAGCACACTGGCC
GGCCAGGAGGTGCTCATGAATCTGCTCCTGGCCCTGCTCCTGGACATCATGACGGTGGCC
GGCGTGCAGAAGCTCATCAAGCGGCGCGGCCCGTACGAGATGAGCCCCAGCCTCCTGGAC
TACCTCACCATGGACATCTACGCCTTCCCGGCCGGGCACGCCAGCCGCGCCGCCATGGTG
TCCAAGTTCTTCCTCAGCCACCTGGTGCTGGCGGTGCCCCTGCGCGTGCTGCTGGTGCTC
TGGGCCCTCTGCGTGGGCCTGTCCCGCGTGATGATCGGCCGCCACCACGTCACGGACGTC
CTCTCCGGCTTTGTCATCGGCTACCTCCAGTTCCGTCTGGTGGAGCTGGTCTGGATGCCC
TCCAGCACCTGCCAGATGCTCATCTCTGCCTGG

ORF Protein

Cloned ORF protein sequence for pF1KB5445 Download

>KIBB5445  271 aa
MPASQSRARARDRNNVLNRAEFLSLNQPPKGGPEPRSSGRKASGPSAQPPPAGDGARERR
QSQQLPEEDCMQLNPSFKGIAFNSLLAIDICMSKRLGVCAGRAASWASARSMVKLIGITG
HGIPWIGGTILCLVKSSTLAGQEVLMNLLLALLLDIMTVAGVQKLIKRRGPYEMSPSLLD
YLTMDIYAFPAGHASRAAMVSKFFLSHLVLAVPLRVLLVLWALCVGLSRVMIGRHHVTDV
LSGFVIGYLQFRLVELVWMPSSTCQMLISAW

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5445 Download

>pF1KB5445  3926 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCAGCTTCC
CAGAGCCGGGCCCGTGCCCGGGACCGCAACAACGTCCTCAACCGGGCTGAGTTCCTGTCC
CTGAACCAGCCCCCCAAGGGGGGCCCGGAGCCCCGCAGCTCGGGCAGAAAGGCCTCGGGC
CCATCAGCACAGCCCCCACCTGCTGGTGACGGGGCCAGAGAGCGACGCCAGTCACAGCAG
CTGCCAGAGGAGGACTGCATGCAGCTGAACCCCTCCTTCAAGGGCATCGCCTTCAACTCC
CTGCTGGCCATCGATATCTGTATGTCCAAGCGGCTGGGGGTGTGCGCTGGCCGGGCGGCG
TCCTGGGCCAGTGCCCGCTCCATGGTCAAGCTCATCGGCATCACGGGCCACGGCATCCCC
TGGATCGGAGGCACCATCCTCTGCCTGGTGAAGAGCAGCACACTGGCCGGCCAGGAGGTG
CTCATGAATCTGCTCCTGGCCCTGCTCCTGGACATCATGACGGTGGCCGGCGTGCAGAAG
CTCATCAAGCGGCGCGGCCCGTACGAGATGAGCCCCAGCCTCCTGGACTACCTCACCATG
GACATCTACGCCTTCCCGGCCGGGCACGCCAGCCGCGCCGCCATGGTGTCCAAGTTCTTC
CTCAGCCACCTGGTGCTGGCGGTGCCCCTGCGCGTGCTGCTGGTGCTCTGGGCCCTCTGC
GTGGGCCTGTCCCGCGTGATGATCGGCCGCCACCACGTCACGGACGTCCTCTCCGGCTTT
GTCATCGGCTACCTCCAGTTCCGTCTGGTGGAGCTGGTCTGGATGCCCTCCAGCACCTGC
CAGATGCTCATCTCTGCCTGGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT