Gene/Protein Characteristic Table for
FXC01174
Species
human
Product ID
FXC01174
Linker Type
Cloning Site
SgfI-PmeI
Description
G protein-coupled receptor 124
Length: 3363 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 1121 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source EAW63357 0 99.9 G protein-coupl... Homo sapiens AAI46775 0 100.0 GPR124 protein ... Homo sapiens BAB84925 5.1e-208 83.2 FLJ00170 protei... Homo sapiens Q96PE1 5.2e-208 83.6 Probable G-prot... Homo sapiens EAW63355 5.2e-208 83.7 G protein-coupl... Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001611 110 123 PR00019 Leucine-rich repeat IPR001611 131 144 PR00019 Leucine-rich repeat HMMPfam IPR001611 85 107 PF00560 Leucine-rich repeat IPR001611 109 131 PF00560 Leucine-rich repeat IPR001611 133 155 PF00560 Leucine-rich repeat IPR001611 157 179 PF00560 Leucine-rich repeat IPR001879 367 421 PF02793 Hormone receptor HMMSmart IPR003591 82 106 SM00369 Leucine-rich repeat IPR003591 107 130 SM00369 Leucine-rich repeat IPR003591 131 154 SM00369 Leucine-rich repeat IPR003591 155 178 SM00369 Leucine-rich repeat IPR000483 190 240 SM00082 Cysteine-rich flanking region IPR003599 253 346 SM00409 Immunoglobulin subtype ProfileScan IPR007110 260 344 PS50835 Immunoglobulin-like IPR001879 327 421 PS50227 Hormone receptor IPR000832 552 727 PS50261 GPCR ScanRegExp IPR000832 844 859 PS00650 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 14 RLLLPLLPWLLLLLAPEARGAPG 36 SECONDARY 23 2 552 LHPVVYPCTALLLLCLFATIITY 574 PRIMARY 23 3 589 HMLLNLCFHIAMTSAVFAGGITL 611 SECONDARY 23 4 666 PMLRFYLIAGGIPLIICGITAAV 688 SECONDARY 23 5 711 FYIPVALILLITWIYFLCAGLR 732 PRIMARY 22 6 799 GVQLGALVTTHFLYLAMWACGAL 821 SECONDARY 23 7 831 VVCSCLYGVAASALGLFVFTHHC 853 PRIMARY 23
Result of homology search against disease genes in OMIM database
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