LHX5 ORF clone FXC11357

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Flexi ORF Clone FXC11357

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Clone info.

Species

human

Clone Name

pF1KB7668 Sequence (with vector) Restriction Map

Product ID

FXC11357

HaloTag Clone PID

FHC11357

ORF Sequence

DNA sequence (1206 bp)
Protein sequence (402 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528952]

Gene

KIBB7668

Symbol

LHX5

Description

LIM homeobox 5

Original Clone ID

cs00168

Features of the cloned ORF sequence

Description

Length: 1206 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 402 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9171.1 2.6e-79 100.0 LHX5 CCDS11316.1 1e-58 74.6 LHX1 CCDS1338.1 2.7e-13 37.1 LHX4 CCDS6994.1 1e-11 38.7 LHX3 CCDS6995.1 1e-11 38.7 LHX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001781 5 60 PF00412 Zinc finger IPR001781 64 121 PF00412 Zinc finger IPR001356 181 237 PF00046 Homeobox HMMSmart IPR001781 4 55 SM00132 Zinc finger IPR001781 63 118 SM00132 Zinc finger IPR001356 180 242 SM00389 Homeobox ProfileScan IPR001781 3 62 PS50023 Zinc finger IPR001781 63 125 PS50023 Zinc finger IPR001356 178 238 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071758 402 605992 100.0 100.0 NP_005559 406 601999 74.6 99.8 NP_203129 390 262700,602146 37.1 98.3 XP_016870657 373 221750,600577 38.7 98.0 XP_005263467 386 221750,600577 38.7 98.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7668 Download

>KIBB7668  1206 bp
ATGATGGTGCACTGCGCCGGTTGCGAGCGGCCCATCCTCGACCGCTTTCTGCTGAACGTG
CTGGACCGCGCGTGGCACATCAAATGTGTTCAGTGCTGCGAGTGCAAAACCAACCTCTCG
GAGAAGTGCTTCTCGCGCGAGGGCAAGCTCTACTGCAAAAATGACTTTTTCAGGCGCTTT
GGCACGAAATGCGCCGGCTGCGCGCAAGGCATCTCGCCCAGCGACCTGGTGCGCAAGGCC
CGGAGCAAAGTCTTTCACCTCAACTGTTTCACCTGCATGGTGTGTAACAAGCAGCTGTCC
ACCGGCGAGGAGCTCTACGTCATCGACGAGAACAAGTTCGTGTGCAAAGACGACTACCTG
AGCTCATCCAGCCTCAAGGAGGGCAGCCTCAACTCAGTGTCATCCTGTACGGACCGCAGT
TTGTCCCCGGACCTCCAGGACGCACTGCAGGACGACCCCAAAGAGACGGACAACTCGACC
TCGTCGGACAAGGAGACGGCCAACAACGAGAACGAGGAGCAGAACTCGGGCACCAAGCGG
CGCGGCCCCCGCACCACCATCAAGGCCAAGCAGCTGGAGACGCTCAAGGCTGCCTTCGCC
GCCACGCCCAAGCCCACGCGCCACATCCGCGAGCAGCTGGCGCAGGAGACCGGCCTCAAC
ATGCGCGTCATCCAGGTGTGGTTTCAGAACCGACGGTCCAAAGAACGCCGGATGAAACAG
CTGAGCGCCCTAGGCGCCCGGAGGCACGCCTTCTTCCGGAGTCCGCGGCGCATGCGTCCG
CTGGGCGGCCGCTTGGACGAGTCTGAGATGTTGGGGTCCACCCCGTACACCTACTACGGA
GACTACCAAGGCGACTACTACGCGCCGGGAAGCAACTACGACTTCTTCGCGCACGGCCCG
CCTTCGCAGGCGCAGTCCCCGGCCGACTCCAGCTTCCTGGCGGCCTCTGGCCCCGGCTCG
ACGCCGCTGGGAGCGCTGGAACCGCCGCTCGCCGGCCCGCACGCCGCGGACAACCCCAGG
TTCACCGACATGATCTCGCACCCGGACACACCGAGCCCCGAGCCAGGCCTGCCGGGCACG
CTGCACCCCATGCCCGGCGAGGTATTCAGCGGCGGGCCCAGCCCGCCCTTCCCAATGAGC
GGCACCAGCGGCTACAGCGGACCCCTGTCGCATCCCAACCCCGAGCTCAACGAAGCCGCC
GTGTGG

ORF Protein

Cloned ORF protein sequence for pF1KB7668 Download

>KIBB7668  402 aa
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7668 Download

>pF1KB7668  4319 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGGTGCAC
TGCGCCGGTTGCGAGCGGCCCATCCTCGACCGCTTTCTGCTGAACGTGCTGGACCGCGCG
TGGCACATCAAATGTGTTCAGTGCTGCGAGTGCAAAACCAACCTCTCGGAGAAGTGCTTC
TCGCGCGAGGGCAAGCTCTACTGCAAAAATGACTTTTTCAGGCGCTTTGGCACGAAATGC
GCCGGCTGCGCGCAAGGCATCTCGCCCAGCGACCTGGTGCGCAAGGCCCGGAGCAAAGTC
TTTCACCTCAACTGTTTCACCTGCATGGTGTGTAACAAGCAGCTGTCCACCGGCGAGGAG
CTCTACGTCATCGACGAGAACAAGTTCGTGTGCAAAGACGACTACCTGAGCTCATCCAGC
CTCAAGGAGGGCAGCCTCAACTCAGTGTCATCCTGTACGGACCGCAGTTTGTCCCCGGAC
CTCCAGGACGCACTGCAGGACGACCCCAAAGAGACGGACAACTCGACCTCGTCGGACAAG
GAGACGGCCAACAACGAGAACGAGGAGCAGAACTCGGGCACCAAGCGGCGCGGCCCCCGC
ACCACCATCAAGGCCAAGCAGCTGGAGACGCTCAAGGCTGCCTTCGCCGCCACGCCCAAG
CCCACGCGCCACATCCGCGAGCAGCTGGCGCAGGAGACCGGCCTCAACATGCGCGTCATC
CAGGTGTGGTTTCAGAACCGACGGTCCAAAGAACGCCGGATGAAACAGCTGAGCGCCCTA
GGCGCCCGGAGGCACGCCTTCTTCCGGAGTCCGCGGCGCATGCGTCCGCTGGGCGGCCGC
TTGGACGAGTCTGAGATGTTGGGGTCCACCCCGTACACCTACTACGGAGACTACCAAGGC
GACTACTACGCGCCGGGAAGCAACTACGACTTCTTCGCGCACGGCCCGCCTTCGCAGGCG
CAGTCCCCGGCCGACTCCAGCTTCCTGGCGGCCTCTGGCCCCGGCTCGACGCCGCTGGGA
GCGCTGGAACCGCCGCTCGCCGGCCCGCACGCCGCGGACAACCCCAGGTTCACCGACATG
ATCTCGCACCCGGACACACCGAGCCCCGAGCCAGGCCTGCCGGGCACGCTGCACCCCATG
CCCGGCGAGGTATTCAGCGGCGGGCCCAGCCCGCCCTTCCCAATGAGCGGCACCAGCGGC
TACAGCGGACCCCTGTCGCATCCCAACCCCGAGCTCAACGAAGCCGCCGTGTGGGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT