Jatropha Genome Database

Jcr4S28292.30   /short
Related links:
Predicted Sequence Links:
Genome Sequence: Jcr4S28292
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q589B5_SILLA 115 80.2 80.2 (tr|Q589B5) ATP synthase CF0 C chain OS=Silene latifolia GN=atpH PE=3 SV=1
Arabidopsis_pep ATCG00140.1 115 79.0 80.2 | Symbols: ATPH | ATP synthase subunit C family protein | chrC:13262-13507 REVERSE LENGTH=81
soybean_pep --No_Hits--        
Medicago_pep IMGA|Medtr4g051110.1 101 75.3 77.9 ATP synthase subunit a chloroplastic (AHRD V1 *-*- B8R490_TRISU); contains Interpro domain(s) IPR005706 Ribosomal protein S2, bacterial-type chr04_pseudomolecule_IMGAG_V3.5 15113402-15108879 E EGN_Mt100125 20100825
grape_pep GSVIVT01021581001 71.6 85.4 90.2  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_unigene contig00003 488 100.0 100.0 length=10213 numreads=756 gene=isogroup00001 status=ig_thresh
A list of protein families, domains and functional sites (searches in InterPro)
Jcr4S28292.30 length: 81 aa.
IPR000454 ATPase, F0 complex, subunit C
method AccNumber shortName E-value location
Molecular Function GO:0015078 hydrogen ion transmembrane transporter activity    
Biological Process GO:0015986 ATP synthesis coupled proton transport    
Cellular Component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)    
FPrintScan PR00124 ATPASEC 1.6e-23 12-31
33-48
50-75
HAMAP MF_01396 ATP_synth_c_bact 18.135 9-77
IPR002379 ATPase, F0/V0 complex, subunit C
Molecular Function GO:0015078 hydrogen ion transmembrane transporter activity    
Biological Process GO:0015991 ATP hydrolysis coupled proton transport    
Cellular Component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain    
Gene3D G3DSA:1.20.20.10 no description 5.4e-26 3-78
HMMPfam PF00137 ATP-synt_C 2.4e-22 9-77
superfamily SSF81333 F1F0 7.3e-21 1-79
IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast
Molecular Function GO:0015078 hydrogen ion transmembrane transporter activity    
Biological Process GO:0015986 ATP synthesis coupled proton transport    
Cellular Component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)    
HMMTigr TIGR01260 ATP_synt_c: 1.1e-19 20-77
IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site
PatternScan PS00605 ATPASE_C NA 40-61
no_ID  
Seg seg seg NA 23-38