HUGE

Gene/Protein Characteristic Table for KIAA1694

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05703
Accession No. :	AB051481
Description :	c-Maf-inducing protein Tc-mip isoform.
HUGO Gene Name :
Clone Name :	fj11293 [Vector Info]
Flexi ORF Clone :	pF1KA1694
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 4235 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1960 bp

Genome contig ID gi51511732f_79936395
PolyA signal sequence
(AATAAA,-22)
+----*----+----*----+----*----+----
ACTTTCAGGCAAAAATAAACTGTAAGTGACTCATC
Flanking genome sequence
(366473 - 366522)
----+----*----+----*----+----*----+----*----+----*
AATGTCTGGCCTTTGTGTGGTTTCTCGGCGCCCAGCGGGAGAAGGTCCAA

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 16 f 80036395 80302866 21 99.5 Perfect prediction

Features of the protein sequence	Description

Length: 757 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAG72498	100.0	c-Maf-inducing ...	synthetic construct
XP_214698	98.5	similar to c-Ma...	Rattus norvegicus
XP_001004724	98.4	hypothetical pr...	Mus musculus
Q8IY22	100.0	C-Maf-inducing ...	Homo sapiens
Q9D486	98.8	C-Maf-inducing ...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

ScanRegExp IPR001680 94 108 PS00678 WD40 repeat

Search method	interpro_ID	From	To	Entry	Definition
ScanRegExp	IPR001680	94	108	PS00678	WD40 repeat

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: ACGTGGAAATCCTCAAGCTGC

Primer_r
: GCGAACCTCTGAATCACGTAC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 16

Experimental conditions

Panel name	: CCR
Primer_f	: CAGCTGACACCTACGAAGATC
Primer_r	: GCTCTGCGGCTGTTAGTCAAG
PCR product length	: 150 bp
PCR conditions	: 95 °C15 sec66 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	1960 bp
Genome contig ID	gi51511732f_79936395
PolyA signal sequence (AATAAA,-22)	+--------+--------+----*----+---- ACTTTCAGGCAAAAATAAACTGTAAGTGACTCATC
Flanking genome sequence (366473 - 366522)	----+--------+--------+--------+--------+----* AATGTCTGGCCTTTGTGTGGTTTCTCGGCGCCCAGCGGGAGAAGGTCCAA

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	16	f	80036395	80302866	21	99.5	Perfect prediction

Primer_f	: ACGTGGAAATCCTCAAGCTGC
Primer_r	: GCGAACCTCTGAATCACGTAC
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1694

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information