HUGE |
Gene/Protein Characteristic Table for KIAA0870 |
Link to :
Rouge |
GTOP | SWISS-PROT/TrEMBL | GeneCards| RefDIC | |
Features : DNA sequence | Protein sequence | Expression | Mapping | |
Product ID : | |
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Accession No. : | AB020677 |
Description : | DENN/MADD domain containing 3. |
HUGO Gene Name : | DENN/MADD domain containing 3 (DENND3) |
Clone Name : | hk06970 [Vector Info] |
Source : | Human adult brain |
Features of the cloned DNA sequence |
Description | |
---|---|---|
Length: 4484 bp
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The cloned DNA sequence was revised by direct RT-PCR/sequencing experiments following the alert of coding interruption by GeneMark analysis.
cloned DNA seq. | ||
Warning for N-terminal truncation: | YES | YES |
Warning for coding interruption: | YES | YES |
Length of 3'UTR 1566 bp Genome contig ID gi51511724f_142130155 PolyA signal sequence
(AATAAA,-17) +----*----+----*----+----*----+----
TATCTTCAGCTTGTGGAGAATAAATCTGGTTTAATFlanking genome sequence
(144927 - 144976) ----+----*----+----*----+----*----+----*----+----*
AAACACTGATGTCCGGCTCCTTACTTCATCCAACAGTGACGGGGGGAAGG
Chr f/r start end exon identity class ContigView(URL based/DAS) 8 f 142230155 142275080 18 99.6 Perfect prediction
Features of the protein sequence |
Description | |
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Length: 1019 aa
This protein sequence is predicted from the revised DNA sequence
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
HMMPfam | IPR001194 | 1 | 112 | PF02141 | DENN |
IPR005112 | 175 | 238 | PF03455 | dDENN | |
IPR001680 | 797 | 838 | PF00400 | WD40 repeat | |
HMMSmart | IPR001194 | 1 | 112 | SM00799 | DENN |
IPR005112 | 175 | 238 | SM00801 | dDENN | |
IPR001680 | 753 | 793 | SM00320 | WD40 repeat | |
IPR001680 | 796 | 838 | SM00320 | WD40 repeat | |
IPR001680 | 977 | 1017 | SM00320 | WD40 repeat | |
ProfileScan | IPR001194 | 1 | 112 | PS50211 | DENN |
IPR005112 | 175 | 238 | PS50947 | dDENN | |
IPR001680 | 762 | 847 | PS50294 | WD40 repeat | |
ScanRegExp | IPR001680 | 825 | 839 | PS00678 | WD40 repeat |
Method | No. | N terminal | transmembrane region | C terminal | type | length |
---|---|---|---|---|---|---|
- | - | - | - | - | - | - |
Expression profile |
Description | |
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RT-PCR-ELISA | Description |
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Experimental conditions
: TGGGGCATTCTGAGAGTGTGG | |
: AGCAAAATCCAACCTCTCCAG | |
: 95 °C |
RH mapping information |
Description | |
---|---|---|
: 8 |
: GeneBridge 4 | |
: TGGGGCATTCTGAGAGTGTGG | |
: AGCAAAATCCAACCTCTCCAG | |
: 116 bp | |
: 95 °C |
How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage ![]() | |